Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tamo6g02401 | ATGCGAATCAGTATAACAACAAATCGTAGCCAGTTTCCCGCCGTACACTTAGCTATCTCCTATCTCTCTGCCTCCTCTAATTTTCACTCTACCGGCATGGCCGCCATATCGGAGAATGGCACTACTGGACCTCCGGCGGTTGACGACAATGTCAAAATCGGATTCTTACGGAAGGAGATGAACACGGAGAAACTCGCTGGAACTGCTATCGCTTACGACCGTCATGTTATCCTCTGCTATAAAACACACGAGACGTGGCCTTCTAGAGTTGAATCATCCGACGACCATCCGCTCCCCAAGCTTCTCGCTGCTGCTCTTAAAGCTCGTAAGAACGACATTCCAGTGAAGACTTTATTGACGATATGCGAGGGCCGTGAAGGTACAGACCTATCGGATGGAGATATATTGCTTTTTCCTGAAATGGTCAAGTACAGGGGATTGAAAGAACCAGGAATCAATAGTTTTGTGGATGAAGTGATTGTAAATAGAAAACAATGGTCTACAGGAATCCAAGAAAAGATGACACATTCACACATATTCGTATGTGCTCATAGCAGTCGCGATAAAAGATGTGGTTTTTGTGGGCCAATTTTAATCAAAAAATTCAAAGAAGAAGCCGAATCAAGAGGATTAAAGAACATCTCCGTGACTGCTTGTTCCCATGTTGGCGGTCACAAGTATGCTGGAAATCTTATAATTTATAGTCTTCAAAACAACAAAGTTTGTGGTCACTGGTATGGTTATGTTGCTCCAAATGATGTCCCTGAATTACTTGACAATCACATTGGAAAAGGTCAAATTATCGAGAGACTTTGGAGGGGTCAAATGGGTGTTCCTTCTATGAAGAAACCACAAAAGGCACTTGAACTTGAGCAACCGGTAATCCCAAATGGAAACGATGTGGTTATCGAAAAGAACAGGGACCAAATAAGCGAAACTAAAGAAGATGAGGGGTTAACAAGTAACATTAAAGAAGATGGTGGGGGGTGTTGTCAAGGTGGGAATAGTGGGTTTTCGTGTTGTAGAGATGAAAAAGAGGTGGAAAAACCGGTGAGTAAAATTGATTTGTTGTGGAAAAAGTGGGAGGAGAATGAGATGGTTACGGTGGCTGTTGTGGTGGGAGTGGTGGTAAGTGTTGGTGTGGCGTATAGCTTTTATAAAAGGTTAAGATGA | 1173 | 42.88 | MRISITTNRSQFPAVHLAISYLSASSNFHSTGMAAISENGTTGPPAVDDNVKIGFLRKEMNTEKLAGTAIAYDRHVILCYKTHETWPSRVESSDDHPLPKLLAAALKARKNDIPVKTLLTICEGREGTDLSDGDILLFPEMVKYRGLKEPGINSFVDEVIVNRKQWSTGIQEKMTHSHIFVCAHSSRDKRCGFCGPILIKKFKEEAESRGLKNISVTACSHVGGHKYAGNLIIYSLQNNKVCGHWYGYVAPNDVPELLDNHIGKGQIIERLWRGQMGVPSMKKPQKALELEQPVIPNGNDVVIEKNRDQISETKEDEGLTSNIKEDGGGCCQGGNSGFSCCRDEKEVEKPVSKIDLLWKKWEENEMVTVAVVVGVVVSVGVAYSFYKRLR | 390 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tamo6g02401 | 390 | Gene3D | Glutaredoxin | 175 | 275 | - | - | |
| Tamo6g02401 | 390 | SUPERFAMILY | Thioredoxin-like | 178 | 279 | IPR036249 | - | |
| Tamo6g02401 | 390 | Pfam | Sucrase-ferredoxin-like | 65 | 274 | IPR009737 | - | |
| Tamo6g02401 | 390 | FunFam | APD1p protein | 176 | 273 | - | - | |
| Tamo6g02401 | 390 | PANTHER | ACTIN PATCHES DISTAL PROTEIN 1 | 47 | 379 | IPR009737 | - | |
| Tamo6g02401 | 390 | CDD | TRX-Fd-Sucrase | 177 | 276 | IPR009737 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tamo6g02401 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 166929 | Tamo3g00088 | Tamo6g02401 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tamo | Tamo-Chr3:15180818 | Tamo6g02401 | Tamo-Chr6:37662495 | dispersed | |
| Tamo | Tamo-Chr3:87224981 | Tamo6g02401 | Tamo-Chr6:37662495 | dispersed | |
| Tamo | Tamo-Chr1:102285677 | Tamo6g02401 | Tamo-Chr6:37662495 | transposed | |
| Tamo | Tamo-Chr3:1233797 | Tamo6g02401 | Tamo-Chr6:37662495 | wgd |