AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo6g02460 ATGGCGGTATCCCTTTTTAGAAAAACCTTAAATCCACTAAACCCTAACATTCGAATCCTCCGATCCTTATCTACCCACGCCGCAGTCTCCGAAAAACCTCACCCTGACACCTCATCATCATCCTCCTTCACCTTTTCGCACACTGACACTGACACTGACACTGCAAACAAGGGAGATGAAATCCACATTAAATCCAACAAATTGGCGGCTTCCACGTCAGTGACAATGCCGATGTCGTTCATGACTGGGTCGATTGTAGGGAAGAGGTTTTACAAGCAAGTAACAACGAGAGCTTCAGATGATGGGATTGGTTGGTCTGTGATGCTTGATTATAGGACTCTTAAAACACCTTCTAAGAGGCCATTAAAATGCCCTACTTTACCTCTAGCCAAAGCTATTGCAGCCGAATGGGAATATCAGCTTACAGATGGAATAAGGCCATTCACAATGCCTCTAATGAGACTTGCATGTACGGCTTTAGAAAGAGTTCCCCTCACTCGACCCAAAATCATTCATAACCTAATGTCACGCTTCCATCAAGACCTTGTCTTTTGCCGGGCCCCACATGACAACGACTTAACACACCCTGTCCACGTATTACAAGTGAAGAAAATCGACCCGCTTTTGAAGTGGGTGGAATCGGAATTTGGGGTCAAACCAGTGGTGTACTCGAGCTTTTTTGGCGGGAAACAAGAAGAGGGTCTTGTGAAGGCGGTTGAAAACGTTGTTAAGAAAACAGATGATAATGAGCTGGCGGCCATTGACGCGCTTACTTCCGCTTCACATTCGTTGATAATCTCAATTGCGGTTTTTCGTGGGGTTATTGGGATTCAAGAGGCAATTGAATTGATTAGACTCGAAGAAGATATGCAGGTTGAAAGATGGGGTTTGGTGGAAGGCGGACACGATCTTGATGTTGCAGATCTTAAGGTGCAGATTGCTTCGGCTGCTGGGCGATTTGGTAATTTTGAAATTGGTACCGTGGTTTATTACGGTTTAGTCCTCGCAGCATTGGATGCAAATTGGTGGTTGCTTCTTGATGTCACAGTAGCAACAAGCTATATCACAGTTACTGCTGCATCCTATCAAAAGATTAAAATCATGCACCCACTCTTTGATTAA 1122 44.56 MAVSLFRKTLNPLNPNIRILRSLSTHAAVSEKPHPDTSSSSSFTFSHTDTDTDTANKGDEIHIKSNKLAASTSVTMPMSFMTGSIVGKRFYKQVTTRASDDGIGWSVMLDYRTLKTPSKRPLKCPTLPLAKAIAAEWEYQLTDGIRPFTMPLMRLACTALERVPLTRPKIIHNLMSRFHQDLVFCRAPHDNDLTHPVHVLQVKKIDPLLKWVESEFGVKPVVYSSFFGGKQEEGLVKAVENVVKKTDDNELAAIDALTSASHSLIISIAVFRGVIGIQEAIELIRLEEDMQVERWGLVEGGHDLDVADLKVQIASAAGRFGNFEIGTVVYYGLVLAALDANWWLLLDVTVATSYITVTAASYQKIKIMHPLFD 373
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo6g02460 373 MobiDBLite consensus disorder prediction 28 59 - -
Tamo6g02460 373 MobiDBLite consensus disorder prediction 31 51 - -
Tamo6g02460 373 Pfam ATP12 chaperone protein 88 213 IPR011419 GO:0043461(InterPro)
Tamo6g02460 373 SUPERFAMILY ATP12-like 74 317 - -
Tamo6g02460 373 PANTHER ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2-ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR 26 317 IPR011419 GO:0005739(PANTHER)|GO:0033615(PANTHER)|GO:0043461(InterPro)
Tamo6g02460 373 Gene3D ATP12 ATPase 150 321 IPR023335 -
Tamo6g02460 373 Gene3D - 85 147 IPR042272 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo6g02460 K07556 ATP synthase mitochondrial F1 complex assembly factor 2