Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tamo6g02531 | ATGCCTTCTATCCCTGAAGAGCCTCTTCTTGCTCCAAACCCAGATCGATTCTGTATGTTCCCAATTCAGTACCCTCAAATTTGGGAAATGTACAAGAAAGCCGAAGCTTCCTTTTGGACGGCCGAAGAGGTCGATTTATCTGAGGATCAACGTCACTGGGACTCGTTAACAGACGGCGAGAGGCACTTCATCACCCATGTCCTTGCCTTCTTCGCCGCCTCAGATGGCATCGTTTTGGAAAACCTAGCCGGACGCTTCATGAAAGAGGTTCAAGTTGCGGAGGCGCGTGCTTTCTACGGATTCCAGATTGCCATAGAGAACATCCACTCCGAGATGTACAGTTTGCTTCTCGAATCCTACATTAAGGACTCTAATGAGAAAAGCAGACTCTTTCGAGCAATTGAGACTATTCCTTGTGTCGAGAAGAAAGCGAATTGGGCTCTCAAATGGATCGATGGCTCGGAGACGTTTGCAGAGCGTATCATCGCGTTCGCGTGTGTCGAAGGGATATTTTTTTCTGGAAGCTTTTGCGCGATATTTTGGTTGAAGAAACGGGGGTTGATGCCTGGATTGACATTCTCGAACGAATTGATCTCGCGAGACGAAGGATTACATTGTGATTTCGCTTGTTTGCTTTACGGGTTACTGAAGATGAAGTTGAGTGAGGAGCGAGTCAAGGGAATCATCTCTGATGCGGTGGCGATTGAACGAGAATTCGTCTGCGATGCCTTACCCTGCGCTCTTGTAGGGATGAACGGTGATCTCATGAGTGAATACATCGAATTCGTTGCCGATAGATTATTAGGCGCATTAGGTTACGGGAAATTGTACAACGCCCAGAACCCGTTTGATTGGATGGAGCTGATTTCGTTACAAGGGAAGACTAATTTCTTCGAGAAAAGGGTGGGCGAGTATCAGAAAGCTTCTGTGATGTCGAATTTGAACGGAAATGGAGACTCACATGTCTTCAAGATGGATGAAGATTTCTAA | 990 | 46.57 | MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSEDQRHWDSLTDGERHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESYIKDSNEKSRLFRAIETIPCVEKKANWALKWIDGSETFAERIIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYGLLKMKLSEERVKGIISDAVAIEREFVCDALPCALVGMNGDLMSEYIEFVADRLLGALGYGKLYNAQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSNLNGNGDSHVFKMDEDF | 329 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tamo6g02531 | 329 | ProSitePatterns | Ribonucleotide reductase small subunit signature. | 105 | 121 | IPR030475 | - | |
| Tamo6g02531 | 329 | PANTHER | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN | 6 | 329 | IPR000358 | GO:0009263(InterPro) | |
| Tamo6g02531 | 329 | Pfam | Ribonucleotide reductase, small chain | 16 | 282 | IPR000358 | GO:0009263(InterPro) | |
| Tamo6g02531 | 329 | SUPERFAMILY | Ferritin-like | 4 | 307 | IPR009078 | - | |
| Tamo6g02531 | 329 | Gene3D | Ribonucleotide Reductase, subunit A | 3 | 307 | IPR012348 | GO:0016491(InterPro) | |
| Tamo6g02531 | 329 | CDD | RNRR2 | 17 | 291 | IPR033909 | GO:0009263(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tamo6g02531 | K10808 | ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] | ||||
| Tamo6g02531 | K00526 | ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 166920 | Tamo3g00035 | Tamo6g02531 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tamo | Tamo-Chr3:776676 | Tamo6g02531 | Tamo-Chr6:40492169 | dispersed | |
| Tamo | Tamo-Chr1:80881189 | Tamo6g02531 | Tamo-Chr6:40492169 | transposed | |
| Tamo | Tamo-Chr2:94522479 | Tamo6g02531 | Tamo-Chr6:40492169 | wgd |