AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo6g02640 ATGAACCCATATCCACCACCGGCATCCTCTTCATCCGCCTCCACTGATCCGGCAGGCAATTATTGGCAGACTCACGTAATGGGTACGCCGGCACCCCCTTCATCCAATCAAAACCACCACCACGCTCCTCCCAACCCCTACGTCCAATACGCCGCTCCTCCTCCTCCACCTTCGTCTCAGGCTCAACCCAACAACATGGATAATGTCCGTAAGAAACTTAATTTATGGGGCAACAAGGCGGAGATCGCGGCTACCAACATCTGGAGCAACCTGAAAACGGGGCAATCGGTGACCGGATCGGCGTGGGGCAAAGTGAGTTTGACGGCGAAAGCGTTAACGGAAGGTGGGTATGAGTCGCTATACAAACAGAACTTCACGACTTACCCACACGAGAAACTCAGCCGGACTTTCGCATGTCACTTGTCGACGTCCACCGGACCTGTCGCCGGAACTCTGTATCTCTCCAACGTTCATGTCGCCTTCTGTAGCGATCGCCCCTTGTCCTCCATTCAACCCAACGGCATGGAAGCTTGGATCCACTACAAGGTAATAATCCCGTTGCAAAAGATAGCCACAGTAAACCCAATTACGGTGCCAAGCAAGAAACAGATAGACAAATACATCCAACTCTCTACAATCGATGGTCAAGACTTTTGGTTTATGGGTTTTGTAAATCATGATAAAGCAGCAAAACATCTTCTAAATGGTGTTTCCAATTGTGTTAAATCAGTTCCAATCGTTCCATAA 747 49.53 MNPYPPPASSSSASTDPAGNYWQTHVMGTPAPPSSNQNHHHAPPNPYVQYAAPPPPPSSQAQPNNMDNVRKKLNLWGNKAEIAATNIWSNLKTGQSVTGSAWGKVSLTAKALTEGGYESLYKQNFTTYPHEKLSRTFACHLSTSTGPVAGTLYLSNVHVAFCSDRPLSSIQPNGMEAWIHYKVIIPLQKIATVNPITVPSKKQIDKYIQLSTIDGQDFWFMGFVNHDKAAKHLLNGVSNCVKSVPIVP 248
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo6g02640 248 SMART gram2001c 119 197 IPR004182 -
Tamo6g02640 248 MobiDBLite consensus disorder prediction 47 61 - -
Tamo6g02640 248 Gene3D - 117 238 IPR011993 -
Tamo6g02640 248 MobiDBLite consensus disorder prediction 1 65 - -
Tamo6g02640 248 Pfam GRAM domain 122 234 IPR004182 -
Tamo6g02640 248 MobiDBLite consensus disorder prediction 7 43 - -
Tamo6g02640 248 PANTHER GEM-LIKE PROTEIN 2 34 238 IPR037848 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo6g02640 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr6:9884401 Tamo6g02640 Tamo-Chr6:45068081 dispersed
Tamo Tamo-Chr6:45068081 Tamo7g01937 Tamo-Chr7:33787020 dispersed