AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo6g02651 ATGGCGACACCTACATACCTATCTGGAGCTAAAACTTCGTTCTATCTTTCTAATACCGCTTCCTACTCCCGATCCATGTGTTCACACCACCAGAAGCTCAGTTTTGCTTCATCGGTTGCTTCATTTGGTCGAGCGTGTAGAGTGGTACAGGTTCCAACTCCAGGAAAGGGAAGAACTCTGAGCGTTGTTTGCAATGTACAAAACGTAGATGTTCTCACCAGAAGTGAACCCGAGAGTCAATTAAGCAAACAGCTATCATGTGTGATGAAGTTTGGTGGATCATCTGTGGCGTCAGCAGAAAGGATGAAGGAAGTAGCCGACCTCATTCTCAGCTTCCCAGAAGAGAGCCCTGTGATTGTCCTCTCCGCCATGGGAAAAACCACCAACAAGCTTATTTCGGCTGGAGAGAAGGCTGCAAGTTGTGTTTCAACTGTATCCGAAATGGATGAATTGGCCTTTGTGAAAGAACTCCATTACAGGACAGTGGAAGAGCTTGGATTAGAAAAAACACTGATTGAAGACCATCTAGAAAAGCTGGAGAGACTTCTGAATGGGATTGCTGTATTAAAAGAATTCACACCACGTGCAAGGGACTACCTAGTCTCATTTGGTGAATGCATGTCCACAAGAATCTTTTCTGCATACTTGAATAAAATCGGTGTCAAAGCACGCCAATATGATGCGTTTGATATTGGTTTCATTACAACTGATGACTTTACAAATGCGGATATTTTGGAAGCAACTTATCCAGCTGTAGCCAAGAGACTGAATGGTGATTGGGTTAGAGATCCTGCAATCCCTATTGTCACTGGCTTCCTTGGAAAGGTCTTTTACAATTTACATGACGTTATTAAAAATGTTTTTATTTTAATATTCAATGGAAAGTTTTTGATTGTTTTATTTGTGTAA 909 41.69 MATPTYLSGAKTSFYLSNTASYSRSMCSHHQKLSFASSVASFGRACRVVQVPTPGKGRTLSVVCNVQNVDVLTRSEPESQLSKQLSCVMKFGGSSVASAERMKEVADLILSFPEESPVIVLSAMGKTTNKLISAGEKAASCVSTVSEMDELAFVKELHYRTVEELGLEKTLIEDHLEKLERLLNGIAVLKEFTPRARDYLVSFGECMSTRIFSAYLNKIGVKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLNGDWVRDPAIPIVTGFLGKVFYNLHDVIKNVFILIFNGKFLIVLFV 302
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo6g02651 302 ProSitePatterns Aspartokinase signature. 88 96 IPR018042 GO:0004072(InterPro)|GO:0008652(InterPro)
Tamo6g02651 302 PANTHER ASPARTATE KINASE 84 276 - GO:0004072(PANTHER)|GO:0005829(PANTHER)|GO:0009089(PANTHER)|GO:0009090(PANTHER)|GO:0009570(PANTHER)
Tamo6g02651 302 Gene3D - 85 285 IPR036393 -
Tamo6g02651 302 SUPERFAMILY Carbamate kinase-like 88 276 IPR036393 -
Tamo6g02651 302 Coils Coil 162 182 - -
Tamo6g02651 302 Pfam Amino acid kinase family 87 274 IPR001048 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo6g02651 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
166729 Tamo2g04560 Tamo6g02651
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr2:94901548 Tamo6g02651 Tamo-Chr6:45515804 dispersed