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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo6g02652 ATGGAGGAACCACCGTCGTCGGATGGGTCCGTCGTAGATGAATCGGAGATAGAATACGTCAGCTACGCGGGAGAGCATCACTTGCCCCTTATTATGAGCCTCGTCGATGAAGAACTCAGCGAACCCTATTCCATCTTTACCTATCGTTACTTCGTCTATCTCTGGCCCAATCTCTCCTTCCTCGCGTTCCATAAGGGGAAATGCATCGGAACCGTGGTTTCTAAAATGGGAGAACACCGTAATACTTTCCGAGGCTACATTGCTATGCTCGTTGTCCTCAAACCTTACCGTCACAAAGGAATCGCTACAGAACTTGTTACCAGATCCATTAAAGTGATGATGGAATCAGGCTGTGAAGAGGTAACATTGGAAGCTGAAGTGACAAATAAAGGGGCACTTGCATTATATGGGCGGCTAGGGTTTATAAGAGCTAAGAGGCTATTTAGATACTATTTGAACGGTGTTGATGCTTTTAGATTGAAGTTGCTTTTTCCACATCCAGAATTACCTCCTTCCCACCCTCACTCCCACTCTGTAATCTCGTCTGTTCTTGAGAGTTATGCCGCACATGAACTTGGTCCATGA 585 45.98 MEEPPSSDGSVVDESEIEYVSYAGEHHLPLIMSLVDEELSEPYSIFTYRYFVYLWPNLSFLAFHKGKCIGTVVSKMGEHRNTFRGYIAMLVVLKPYRHKGIATELVTRSIKVMMESGCEEVTLEAEVTNKGALALYGRLGFIRAKRLFRYYLNGVDAFRLKLLFPHPELPPSHPHSHSVISSVLESYAAHELGP 194
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo6g02652 194 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 22 166 IPR016181 -
Tamo6g02652 194 CDD NAT-SF 59 124 - -
Tamo6g02652 194 PANTHER N-ALPHA-ACETYLTRANSFERASE 30 11 168 IPR044542 GO:0004596(InterPro)|GO:0004596(PANTHER)|GO:0017196(InterPro)|GO:0017196(PANTHER)|GO:0031417(PANTHER)
Tamo6g02652 194 FunFam N-alpha-acetyltransferase MAK3 isoform A 24 177 - -
Tamo6g02652 194 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 17 165 IPR000182 GO:0016747(InterPro)
Tamo6g02652 194 Gene3D - 20 178 - -
Tamo6g02652 194 Pfam Acetyltransferase (GNAT) family 31 141 IPR000182 GO:0016747(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo6g02652 K00670 N-alpha-acetyltransferase 30 [EC:2.3.1.256]
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Tamo Acetyltransf_1 3e-16 CL0257 TR GNAT