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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo6g02674 ATGGCGGTAGCGAAGCTGCTTCTCCCGTCTCTCAATCTGCCGTCCAAATTGAAACTCAGTAGAGAACCTCCATCTCTCCATAATCAGCCATGGGGTTTAAAGAAGAAGAGACGACGGTATCCGCCTCGGATTTCCTCTTCGCTTCACGAGACTGCATCAATCGCCGTTCACAGCCCTCTGTTTGTGCTTGCAGACGCCGCCGTCGGCTATTCTAATGCTAGCTATTACACCTCTCTGGGTCTATTTGTCATCTCTGTACCAGGTCTTTGGTCCCTCATCAAGCGCTCCGTTAAATCCAAGGTGGTGAAAAAGACATTCGTTGAGGAACAGAAGGAAGGAGAGAAGAAGGCGCCTAACCAGCTAGCCGGAGAAATTCTTTCCTTCTTCACTCGCAACAACTTCTTAGTGTTGGATAAAGGAGAGACAATCACGTAA 435 48.74 MAVAKLLLPSLNLPSKLKLSREPPSLHNQPWGLKKKRRRYPPRISSSLHETASIAVHSPLFVLADAAVGYSNASYYTSLGLFVISVPGLWSLIKRSVKSKVVKKTFVEEQKEGEKKAPNQLAGEILSFFTRNNFLVLDKGETIT 144
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo6g02674 144 Pfam Cofactor assembly of complex C subunit B 74 143 IPR021919 -
Tamo6g02674 144 PANTHER - 2 144 IPR021919 -
Tamo6g02674 144 MobiDBLite consensus disorder prediction 19 38 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo6g02674 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr6:46180653 Tamo6g02674 Tamo-Chr6:46355132 proximal