AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi11g01015 ATGACATCAAGAACTTTGAGAAGGCGGCTCCATCATGGGGATGTTGATGTAGATGTAAAAAGGCATGAGCATTTGGAGACATCAGGATTGGATGGCTTGAATGAACCTTTACTAGGGAATAGGGGGGATGATGATGATAGGGAGGGATACACTCTTGAAGATAATTGGGATGATGAACGGAGAAAGGAGCGCATACACTGGACGCGTCTTTTCTCTAACTTGCTAGCTCAATGGGCACAATGGTTAGCAAATATCGTCCTTGGATCTGGATCATTTCTTGGAAGGCTTGTGTCTCGTTCTTCCACCACTTATAATGGACAAGACAACATTCCACTCTCTCTTAGCCCTTTACAGGAAGAAAGACTCAGAAATCTACAGCAAAGGCTGGAAGTCCCCTTTGATGGTTCTCGTGTCGAGCATCAAGATGCACTCAAGCAACTATGGAGGTTGGCTTATCCTAATAGAGAACTCCCGTCTCTAAAATCAGAGCTTTGGAAGGAGATGGGTTGGCAAGGTCCTGACCCTTCAACAGATTTTAGGGGTGGTGGATTTATTTCATTGGAGAATCTTATCTTTTTTTCCAAGAGCTATCCGGTTTGTTCTCCTCTTTCATTTACATGCTTCGTCTTTAATTCTCTTATTTCAATCGAAATATCCGATAGAGGGACCAAGGTGGAGAACAGCTTTGCATGGAACCAAGTTTTGGCTCTTTGGTTTCTGAGGTCTATGAGAAATGCCAATGACTGGGAGTTCGAATCCTTGTCAATTTTCTTTGTTAGTCTAGAGCGGGATTCATTCCAGAGGTTGTTGCACAAACAAGAAGGAAGGAGAGCTGAGTGGGAGTATCCCTTTGCTGTAGCTGGCATCAATATATCTTTTATGTTAGCACAAATGTTGGATCTTAAATCAGGCAGACCAAATTCTTTGGCAGGAATCCGCTTCTTAGAACTGCTGAGAGCAGATGAAATGGCATTTGATAACCTTTACTGTGTAGCTTTTCAAATGATGGATGCTCAATGGCTTGCAAAGCGTGCCTCTTATATGGAATTTAACGACGTTCTGAAGTCTACGAGAACGCAGTTAGAGCGTGAGCTTGCTCTTGAAGATTTATCAAGTGTGAGAGATTTACCAGCTTACAACCTGTTGAACAGATAG 1155 42.77 MTSRTLRRRLHHGDVDVDVKRHEHLETSGLDGLNEPLLGNRGDDDDREGYTLEDNWDDERRKERIHWTRLFSNLLAQWAQWLANIVLGSGSFLGRLVSRSSTTYNGQDNIPLSLSPLQEERLRNLQQRLEVPFDGSRVEHQDALKQLWRLAYPNRELPSLKSELWKEMGWQGPDPSTDFRGGGFISLENLIFFSKSYPVCSPLSFTCFVFNSLISIEISDRGTKVENSFAWNQVLALWFLRSMRNANDWEFESLSIFFVSLERDSFQRLLHKQEGRRAEWEYPFAVAGINISFMLAQMLDLKSGRPNSLAGIRFLELLRADEMAFDNLYCVAFQMMDAQWLAKRASYMEFNDVLKSTRTQLERELALEDLSSVRDLPAYNLLNR 384
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi11g01015 384 ProSiteProfiles ELMO domain profile. 139 365 IPR006816 -
Tesi11g01015 384 PANTHER ENGULFMENT AND CELL MOTILITY 59 382 IPR050868 -
Tesi11g01015 384 Pfam ELMO-CED-12 family 124 198 IPR006816 -
Tesi11g01015 384 Pfam ELMO-CED-12 family 256 354 IPR006816 -
Tesi11g01015 384 MobiDBLite consensus disorder prediction 30 50 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi11g01015 K23538 ELMO domain-containing protein
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr11:23843817 Tesi17g00573 Tesi-Chr17:31278859 dispersed
Tesi Tesi-Chr11:23843817 Tesi3g00770 Tesi-Chr3:51393415 transposed