AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi11g01054 | ATGACTACTCTCGGAGGAATTAGCGATTCCAAGGGCACTCAGAACAGCGCTGAAATCCAAAGCCTTGCTCAGTTCGCTGTCGAAGAGCACAACAAGAAAGAGAATGCACTGCTTGGGTTCGTGGGGGTACTGAAGGCAAAAGAGCAGGTGGTTTCCGGTACTCTGCATATTCTTACACTGGAGGCAATGGATGCCGGTAAGAAGAAGATCTATGAAGCAAAAGTCTGGGTGAAGCCATGGCAAAACTTCAAGGAGTTGCAGGAGTTCAAGGCCATTGGTGACTCACTACTCTAG | 294 | 48.64 | MTTLGGISDSKGTQNSAEIQSLAQFAVEEHNKKENALLGFVGVLKAKEQVVSGTLHILTLEAMDAGKKKIYEAKVWVKPWQNFKELQEFKAIGDSLL | 97 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi11g01054 | 97 | Pfam | Aspartic acid proteinase inhibitor | 16 | 91 | IPR000010 | GO:0004869(InterPro) | |
| Tesi11g01054 | 97 | SMART | CY-4 | 2 | 92 | IPR000010 | GO:0004869(InterPro) | |
| Tesi11g01054 | 97 | Gene3D | - | 1 | 96 | - | - | |
| Tesi11g01054 | 97 | SUPERFAMILY | Cystatin-monellin | 5 | 93 | IPR046350 | - | |
| Tesi11g01054 | 97 | FunFam | Cysteine proteinase inhibitor | 1 | 97 | - | - | |
| Tesi11g01054 | 97 | PANTHER | CYSTATIN FAMILY MEMBER | 2 | 93 | IPR027214 | GO:0004869(InterPro)|GO:0004869(PANTHER) | |
| Tesi11g01054 | 97 | ProSitePatterns | Cysteine proteases inhibitors signature. | 48 | 61 | IPR018073 | - | |
| Tesi11g01054 | 97 | CDD | CY | 5 | 90 | IPR000010 | GO:0004869(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi11g01054 | - | - |