AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi1g00354 | CTGGTGGATAGAAGGAAACCAAAGCAAATGACGGATCTGAATCTGGAGTTGCAGGAGTCCGGTTGGGAAGAATTGAGGAAGGAGGCTCGGAAGATTGAGGGAGATCTCGACGTCAAGCTCTCTTCCTATGCTAAGCTCGGTTCAAGATTCACTCATGGAGGTTATGCCGATACTGGGTCGCCAACTGTCGGGTCCAGCAGATCATGGACGTCTATGGAAATGGAGATTCAATCCTTGCTTGAGAAGCTGCTAGATACCAATGATGCCATGAGTAGGTGTGCTGCGTCTGCATCACCTACTACATCGGTTACTCAGAAGTTAACAAGGCACAGAGACATACTTCATGAGTTTGCACAGGAATTTAGACGAATCAAGGGAAATATAAATTCCATGAAGGAGCATGCGGAGCTTCTTAGTTCTGCCAGGGATGATATCAGTGAGTACAAGGCATCTGGGAGTATGTCGCCTAGAATGCATTTATTACGAGAGAGAGCTGCCATACATGGAAGCATAGCTCATGTAAGACTGAAATGCTCATATTTCTGTCATCTAATTCTCTAA | 561 | 45.63 | MVDRRKPKQMTDLNLELQESGWEELRKEARKIEGDLDVKLSSYAKLGSRFTHGGYADTGSPTVGSSRSWTSMEMEIQSLLEKLLDTNDAMSRCAASASPTTSVTQKLTRHRDILHEFAQEFRRIKGNINSMKEHAELLSSARDDISEYKASGSMSPRMHLLRERAAIHGSIAHVRLKCSYFCHLIL | 186 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi1g00354 | 186 | PANTHER | GOS-28 SNARE- RELATED | 18 | 173 | IPR023601 | GO:0000139(InterPro)|GO:0000139(PANTHER)|GO:0005484(PANTHER)|GO:0005797(PANTHER)|GO:0005801(InterPro)|GO:0006888(PANTHER)|GO:0006888(InterPro)|GO:0006906(PANTHER)|GO:0016020(InterPro)|GO:0031201(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi1g00354 | K08495 | golgi SNAP receptor complex member 1 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr1:6888466 | Tesi4g00433 | Tesi-Chr4:11236413 | dispersed | |
| Tesi | Tesi-Chr22:22509929 | Tesi1g00354 | Tesi-Chr1:6888466 | transposed | |
| Tesi | Tesi-Chr1:6888466 | Tesi21g00604 | Tesi-Chr21:12291332 | wgd | |
| Tesi | Tesi-Chr1:6888466 | Tesi22g00341 | Tesi-Chr22:22480655 | wgd |