Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi1g00362 | ATGAGTACAGGAGAGCTTCTCAGCATCGAACCTCAAGAGCTCAAATTCCCCTTCGAACTGAGGAAGCAGATCTCATGTTCTCTTCAATTGTTGAATAAGACGGATAGCTATGTAGCTTTCAAGGTGAAGACAACGAATCCTAAGAAGTATTGTGTTCGGCCGAACACTGGAGTTGTCTTGCCTCGGTCCACATGTGATGTTATAGTTACGATGCAAGCACAACGAGAGTCTCCTCCCGACATGCAATGCAAGGACAAGTTCCTCCTTCAGAGCGCAATTGCTAGTCCTGGTGCTACCTCAAAGGATATTAACCCGGAAATGTTCAACAAGGAGTCAGGAAATCTGATTGAAGAGTGCAAATTGAGAGTTGTTTATGTTTCCCCGCCCCAACCACCATCACCAGTCCCAGAAGGATCTGAGGAAGGTTCTTCACCAAGGGCTTCCATATCGGACAACGGGAATTCAAATACTTCTGAGTTTATTGCTGTTTCAAAACCATATGTTGAGCCGCAAGATAAATCTTTAGAGGTGAGATTTTCTCTTGGTTTGCCTATTCAGTTATTGAATTTGAAGCTTTTATAG | 582 | 43.64 | MSTGELLSIEPQELKFPFELRKQISCSLQLLNKTDSYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQAQRESPPDMQCKDKFLLQSAIASPGATSKDINPEMFNKESGNLIEECKLRVVYVSPPQPPSPVPEGSEEGSSPRASISDNGNSNTSEFIAVSKPYVEPQDKSLEVRFSLGLPIQLLNLKLL | 193 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi1g00362 | 193 | PIRSF | VAMP-assoc-prot | 1 | 179 | IPR016763 | GO:0005789(InterPro) | |
| Tesi1g00362 | 193 | Pfam | MSP (Major sperm protein) domain | 7 | 109 | IPR000535 | - | |
| Tesi1g00362 | 193 | FunFam | Vesicle-associated protein 1-1 | 1 | 129 | - | - | |
| Tesi1g00362 | 193 | ProSiteProfiles | Major sperm protein (MSP) domain profile. | 6 | 126 | IPR000535 | - | |
| Tesi1g00362 | 193 | SUPERFAMILY | PapD-like | 2 | 141 | IPR008962 | - | |
| Tesi1g00362 | 193 | Gene3D | Immunoglobulins | 2 | 130 | IPR013783 | - | |
| Tesi1g00362 | 193 | PANTHER | VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN | 6 | 153 | IPR016763 | GO:0005789(InterPro)|GO:0005789(PANTHER)|GO:0005886(PANTHER)|GO:0061817(PANTHER)|GO:0090158(PANTHER) | |
| Tesi1g00362 | 193 | MobiDBLite | consensus disorder prediction | 143 | 158 | - | - | |
| Tesi1g00362 | 193 | MobiDBLite | consensus disorder prediction | 127 | 158 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi1g00362 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr14:37365200 | Tesi1g00362 | Tesi-Chr1:7026883 | dispersed | |
| Tesi | Tesi-Chr1:7026883 | Tesi21g00617 | Tesi-Chr21:12648503 | dispersed | |
| Tesi | Tesi-Chr1:7002741 | Tesi1g00362 | Tesi-Chr1:7026883 | tandem |