AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi1g00380 ATGGATTATGATGACAATGACTTGCAAAGCCAGAATTTTCAGTTAGCTGGTGAAGAGACCATCAAATTTCCTCCAGGCTTGCGCTCATATGCTCTTCCCAAGTTTGATTTGGATGACAGCCTTCAGGTCCATCTAAGGTTTGATAGTTTGGTTGAAACTGAGGCTTTACTTGGCATTCAAAGTCAAGAACAAAACCAGTGGATCGAGGATTTCTCGCGGGGGAGTAGCGTGATAGAGTTCAGTTCAGGTGCTGCTGAATCTTGTTCCATTTCAAGGCATAACAATGTTTGGTCTGAGGCCACTTCATCAGAATCTGTTGAAATGCTACTTAATTCTGTTGGGCAGGATGAATTAATCATGGAACAAACTATAATTGAGGAGTCAGATGTCTGTGATGAACTTGGTAGCTTAACGAACCAAATGGAACCCAATCTCAAACAAGATGGTTCTACTCCGTCTAAGACAGGGGTTCTTGTAGATTCGAGCTGTGCATTACCATTTGAGGAGTGTCTAGAAAGCTTGACTGGGTTAAATAAAGATGCAGTAATGGAGCTCTCTGAGATTGAACCTACCTCTCAGACTCATGAAAGCGAAAAATCTGAGCATGGAAGTTCAGGAGACTTGGATCCATGTTCAGTTAGTGAAAAGTATGGCTTACCTGTGACTGAGGGGAGTGTTTTGATTGACGGAAAATGCACTAATGCAAATCAGAGGGAAGATGGTCCTTTGGTTGATGGATCTCTAGATAATAGGACAGGAAATGATCCCACTACTTCGAAGAAAGTTGATAACTTAGCTACCTCTATGCAGAATATAATTGCAAGTGTTGGGGAGTTGAACAGTCAAGGTTCCCCACAGCAGGGAACTGATATTGCTTATGAGAATGCAGAGGGTTTACAAAAAGTTGATGATGAGAAAGGTGTGGAACACCAGGTTCTGAACAAAGAGGCTCAGACGGATGTTCAAAATTGTGAAGGATATGCAGTTGAAAGTAAGATCAATAACGAGGAGAATCCTTTCAGAATGACGATGGATTCTAAGCTGCAGATTGCTGAAGGAAAAGTGGCTGAAACTAGTATCAATATTGTGGAGAATCCTTTCAGTTTGGCACTGACCATGGATTCTACGGTGATGCAAATAGCAGAAGGATGCAGTGAGGATGCATGTTCCATAAACCCTACTCCAATAAGTGATTGTGAAGTTGTGGCTTCATCCAAAGACACTGAGCTTGATGATCAACTCATAGGTAATACACATGAGGCATCAGTTGTTGTGGTTGAAGGGAATAATAATAGTTATGACAGGCTTACTATTGAGATCGGCGATACCAATGCAGGAATTGATACCAGTCTAGAGCTGAAGATGGATTCTGTTGCACAGATAACAAACGTTCAGAGCAATGTCATATTTTTTGAGAAACAAGAGGATTTGTTAGAAACTGATGGTCACCAACTGGAAACTGATTCAGTCAGTAATTCTGAGACGTCTTTGTTGACATTGGAAGACAATAAACTTTTTGCAGGCGATGGTGATAGAAGCAGCAAAAGTAATGTGGGGGACATTTCTAGTTTGACAGCTGAGGTGTGCTCTTCAGCTAACCTACTTTGTGAGACACTGGCAATTGGAAACGTAAAAGATGGTCTTGATGGTTTAGGAGTTCAAGTAGACAACTTTAATGCAAAGGATCATATCTCATCTTCCATGCAGGTTGAACCCATGCAAGCATGCGAAAAAAATTTAGTTGTCGGGCAAAGTGAAATTCATAACAGTAAACAAGATGTTTCTGTTCTTGAAAAAGGGAATGCATGCTTACATATTGACTCAGGGAATATGGATTGTAAGAGTGATGGTTGTCTTACCATTGAGAAGAAGGCCACATCCTCTTCTCTAGGTCAGAGTACTGCGGAAATAGAGGTGACAGCTCACAAATCATCATCTTATCAGATTGTTGGTGATGAACCAGTGTCAACTGGGGTTTTCTTGGAAGATCCCAATGTGGCATCCTGTAACACATTGGATGGTGTTCACCACTTGCTTTCTGCAAATGGAGTTGCCACAGATATAGTTATTGAGCACCAAGAGGATGGAAAGTCACCTTTACTTGTGGGAAATTATACTCACTCGGACAAAAAGGAAGAAACTGTAACTAAGTTCTCCACCGAACCAAGTTCATCAGCCCCGAAGGAGTTCTCTCAAATGGAAAGTGTGCCAGTTCCAGTTTCTGAATTTGAACAAGGTGCAATTCATGACAATACCGGGCAGGGGGTATGTGAGACGGTTGGTCTTTCTTCATCCCCTAAGGAGGCTGTTAGTATATCATTCCAGAATGAACCTCAAGAAGTGGTAGCAAACAAAGCCACTCCAGAACACTCAAAAGAGTTAGAAGTGTGTCCTGTTCTCCATGATTCTACTGTGAAAGAAAATGATGATGCTGAAGTAATAGGAGTTGCTTTTGAAAATTATGAAGAAGCATCCTTAAGAGTTGCAGGAATAATGCCTAGCAAAGGTGAGACCCTCACAAAGACACTACCTTTGTCCATGGAGGAATCTTCTTGTGGTATTAGCCAAAAGGATCAGTTTGATATTGGCCAAAAAGACCGGGAAGACAGTGATGCTAGCTTGGTATCTAGAGATAACAGCAGCATGCAGATTGTCCTTGCAAGCACAGATGATACGTTTAATGGTTGTGAGGGCGCCACTAGACCTGCTAGTTTGTCTGAATGCAATGCTGAATTTGATGCCCCGGAAACTGGAAGCAAGAGTCCAAATTCCGATGAACCTAATTGTGGTTCACCCACTGTCATTAGTTACAGTATGCTTTCTCAAAGTGAAAAGGAAAACCCAGAGGGAGGTAAGGGGTCCTTAGATCAGAATTCCCCAGTTTCTGATGCCATAGATGGGGTAGGCAATCCAGTTGGATATATTCCTCATGATCGCAAAAGAATTGATGCATCTGAAGATGACAAGAGCTTCACTTTTGAGGTCAGCTCAATGACAGATCTGTCTGATAGAGAAACTGACAAGGGATGGAAGCCATTTCTCAGTATTCAAGCTTGTGAATTTCCTCAGACTGTAGAGGGTTCTGCTTCAACAACATCTGGCTCATGCATAATGGATCCGAAGATGTTACAAGAAATTCCTCGTGAAACTCCTCAAGCATCTGATGGAGAGAATGTATGTGGCAGTTCTAAAGGGACTTCTGAGCGTAAAACAAGGCGAGTGTCTAGTAAGGCAGCTGACAAGGAAACTTCTAAAGAAGGGAAGCTTCTAAAACAAATAACCTCTGTAAGAAAGACGGCAGAAAGAGGAGCCAAGTCATGCAATGTATCCCCTAGCTCACTAGGGACTATAAGTCAGGTTGTGCAGGCCAAAGATGTGCGGCCCTATGGATACATTGAAGGCAGAAGTACAAAAGTATGTGCTGTTCCTACTGTTCAGACATCTAATCTGCCAGATTTGAATACTTCAGCTTCTCCATCTGCACTGTTTCAACAGCCTTTCTCGGACTTTCAACAAGTGCAATTGCGTGCTCAGATATTTGTTTATGGATCTTTAATCCAAGGAATGGCACCCGATGAGGCCTTACCCACTGGATGCTTGACAGTCATGAATTGTGTTGAACTTATAGATGGTGGAAGGAGCGTCTGGGATAACGTCTGGCGTGTTGCCGTAGAAAGGTTTCACAATCAGAAATCCCCACTCAGTAACCCTGAGACTCCTCAGCAATCACGCTCGGGTGCTAAAGCTCCTGAACAAGCAACTAGACAAAGTGCTCTTCAAAGTATAGCTCTTCCCTCACCTGTCGGTCGAGCTGGCAGTAAGGGTACTCCTTCAGCAATTATAAATCCTGTGATACCCTTGTCATCGCCACTGTGGAATATGTCTACCCCTTCTCGTGATGGATCGCAGCCCAACAGCATGCCAAGGGGCCCATTTTTAGATTCCCATCAGGCACTCTCTCCATTGCAGCCTTATCAGTCTCCGCATATAAGGAACTATGTAGGACACACAACTCCTTGGCTATCTCAGCCCTCTTCTCCGAGACCCTGGATTGTTTCTCCACAAACTTCTGCACTTGATGCCGGTGCTCATTACTCTGCATTGCCCATTACAGAAACAGTTCATGTAACCTCTATTCGAGAATCATTTGTACCACGTCCCTCTGGTATGAAGCTTGCACCTCCTAGTCCTTTGGTTCATAGTGGGGGTCCTATGAGTGTTTTTACAGGAACTGCTCCTTTAGTGGAGGCAAAAAAGACTGTATCACCTGCTAAGCATGCTTCTGTGGATACAAAGTCTAGAAAGAGAAAAAAAATTCCTACTTCTGAGGAGATTGGCCAGATCTGTTCTCCTGCTCAAGCTGAAACGGAACCAATTCTGGCTCCTGATGTTACTACTCATCTGTCCACATCTACTGCCATCACAACCCCTGGTAGCTCTGCACCTAAAAGTACACCTGGTAATTTTACTGTGGATATTTCTCCCATGTCTTCCGCACATTACCAGATAACAGGGGGTCGGGATACAGAGCAGGGACTTGTATTTTCAGAGGAAATGTGCAGTAAAGTTGAGCAGGCTAAGCTACATGCAGAGGATGCTACTGCTTTTGCTGCTGCTGCAGTCAGGCACAGCCAAGGAATATGGAGTAAATTGGCTGACCAGAAGAATTCTGGATTGGTTTCAGATGTTGAAGCCAAACTAGCTTCTGCAGCTGTTGCAGTAGCAGCAGCAGCTTCTGTTGCAAAGGCAGCGGCAGCAGCTGCTAAGGTTGCATCTGATGCTGCATTGCAAGCTAAACTGATGGCTGATGAAGCCTTGGTTTCAAGTAGAACTGGGAATCCTATACAAAGTACTGAAACTTCTTTTGACGTGAATAATTTGGGAAGGGTTACTCCTGCATCCATCTTAAAGGGAAAAGACAGAACCAATAGTTCCAGTTCTAGTTCCATTATTGTTGCTGCAAGAGAGGCTGCTAAGAAGAGGGTTGAAGCAGCTTCTGCTGCAACAAAACGAGCGGAGAATTTAAGTGCAGTAGTAAAAGCTGCAGAGCTGGCAGCAGAAGCTATAACACAAGCTGGAACAGTTATTGCTATGGGTGATCCTTTACCTTTGACTATGAGTGAGTTAGTGGAAGCAGGTCCAGAGGGCTATTGGAAAAGACAACAAGTTTCTTCCGATCTGCTTGTTGAATCAAACAGTAGAAATAAAGGAGAACAAACTAACATAGATGGTGTTGTAGAAGGTCTATATGCTAAACATTTCAACAAACAACCATCAAACAAGAAAGAAGCAAAATCTATATACCAAGGGAAGCGGGCTTCTTCAAAAGAGATGGCCAGGGAGTCGGTGGAGGACCATGTGGGGTTGGTAAAAGGCATGCTCTGGGATCCTGGCACAAGTACTGAAAAGCAGCTGGGAGGACAAAAAAGTTCTAAAGTGTCCGACTCAGCTAAAACCATTGGGGTGGTTCCTGAATCTGAGATTGGTACAGAATTTGCTTCCACCACTGTCCAGAATGAGGACTGTGAAGGACATCAGCCAGTGAGGACTTCAAAAGAGAATAGCATCAGAGAGGGTTCCCTTGTAGAGGTTCTCTCTGACGAGGATGGTCTTAGAAGGGTTTGGTTCTCAGCCAAGGTACTGAGTTTGAAGGATGAAAAAGCTTATGTCTGTTACACTGAACTTCCGCCAAATGAAGACTCTGGGAAGCTAGAGTGGGTGGCAATCAATGGTGAAGGAGATAATGCACCCAAAGTACGCATTGCCCATCCCATGACTACTATGAAATTTGAAGGGACAAGGAAGAGACGCAGAGGGGCCACAGGGGATTATGCTTGGTCTGTTGGAGATAGGGTGGATGCATGGATACGGGACGGTTGGTGGGAAGGAATTATAACAGAAAAGAGCAAGGAAGATGAAACAACATTGACTATTCAATTTCCAGATCAAGGAGATACTTCAATTGTTAGAGCTTGGGATCTTCGGCCATCTCTCGTTTGGAAGGATGAACAATGGATGGAATGGTCCAGTCCAAGGGAAAATAATTGCTATCCCCATAAGGGAGATACTCCGCAGGAAAAGAGATTAAAGTTGGGCAGTTATGGAGCTGTTGATCCTGCAGTCGAGACCAGAGGGAAGGATAAGATGTCAAAAAGTATTGCCATTGAGGAATCAGGGAAACTTGAAGAGTCAAGGTCTCTGGCATTATCTGCGAAGGAAAAAATATTCAATGTTGGGAAGAACATCAGAGAGGAGAACACGTCTAATGCACTCAGAACGAAGCGAACTGGTTTGCAGAAGGAAGGATCGAGAGTGATTTTTGGTGTTCCTAAGCCCGGAAAGAAAAGGAAATTTATGGAAGTAAGCAAACATTATGTTGCAGATAGGGGTGGTAAGATAAATGAAGGAAATGATCCGATTAAATTTGCAAAATACTTGATTCCTCAAGGATCAGGATCCCGTGGATGGAAAAATACATCTAAAGTTGTTTCCAAGGAAAAACGACCAGCTGAATCTAAGCCCAAGGTGCTTAAGTCTGGAAAACCACAAAGTGTTCCAAGTAGAGGCTTACCTCAGAAGGATAATTCTTTGACGTCTGCTGTCTCAAATGATGGTTCTGTGCGAGATCATTTACCAAATGTCAAGGCTTCTGTTAGCCATGATGAGAGCATGCCAGGGAAGCAGAACCTGATAGACATTGGTCCTTTTCCAAATCCTCACAAAGCAGCTGAGGGCCAAGTGCTATTTTCTTTGTCAGGTCTCCCTACTGATAGTACTTCCTCTGAGAAAAAGTCCTCTTCAGCTGTTGAAACTGACTGGGTTAATAGAGGAAAACTTGCCCCTTCTGGTGCTAAGTTGGCTAGAATTGAAGAAAAGGACACAGGTCAAAATGATTATCCTGGAAAATCAATCCCTGAAGTTGTTGAGCCCCGTAGATCCAATCGCAGGATTCAGCCAACATCAAGGCTATTGGAAGGGCTACAAAGTTCCTTGATCGTCTCAAAGATTCCCGCTGTTCCGCATGACAAAGGAAAACTCTCCAGGAATCAGGACCCGCCTACTGCCTCATTCAGAAAGAAATTCATATCCACAGGTGACTCCTGGCTCCATTACTATCTGATGTGA 7125 43.56 MDYDDNDLQSQNFQLAGEETIKFPPGLRSYALPKFDLDDSLQVHLRFDSLVETEALLGIQSQEQNQWIEDFSRGSSVIEFSSGAAESCSISRHNNVWSEATSSESVEMLLNSVGQDELIMEQTIIEESDVCDELGSLTNQMEPNLKQDGSTPSKTGVLVDSSCALPFEECLESLTGLNKDAVMELSEIEPTSQTHESEKSEHGSSGDLDPCSVSEKYGLPVTEGSVLIDGKCTNANQREDGPLVDGSLDNRTGNDPTTSKKVDNLATSMQNIIASVGELNSQGSPQQGTDIAYENAEGLQKVDDEKGVEHQVLNKEAQTDVQNCEGYAVESKINNEENPFRMTMDSKLQIAEGKVAETSINIVENPFSLALTMDSTVMQIAEGCSEDACSINPTPISDCEVVASSKDTELDDQLIGNTHEASVVVVEGNNNSYDRLTIEIGDTNAGIDTSLELKMDSVAQITNVQSNVIFFEKQEDLLETDGHQLETDSVSNSETSLLTLEDNKLFAGDGDRSSKSNVGDISSLTAEVCSSANLLCETLAIGNVKDGLDGLGVQVDNFNAKDHISSSMQVEPMQACEKNLVVGQSEIHNSKQDVSVLEKGNACLHIDSGNMDCKSDGCLTIEKKATSSSLGQSTAEIEVTAHKSSSYQIVGDEPVSTGVFLEDPNVASCNTLDGVHHLLSANGVATDIVIEHQEDGKSPLLVGNYTHSDKKEETVTKFSTEPSSSAPKEFSQMESVPVPVSEFEQGAIHDNTGQGVCETVGLSSSPKEAVSISFQNEPQEVVANKATPEHSKELEVCPVLHDSTVKENDDAEVIGVAFENYEEASLRVAGIMPSKGETLTKTLPLSMEESSCGISQKDQFDIGQKDREDSDASLVSRDNSSMQIVLASTDDTFNGCEGATRPASLSECNAEFDAPETGSKSPNSDEPNCGSPTVISYSMLSQSEKENPEGGKGSLDQNSPVSDAIDGVGNPVGYIPHDRKRIDASEDDKSFTFEVSSMTDLSDRETDKGWKPFLSIQACEFPQTVEGSASTTSGSCIMDPKMLQEIPRETPQASDGENVCGSSKGTSERKTRRVSSKAADKETSKEGKLLKQITSVRKTAERGAKSCNVSPSSLGTISQVVQAKDVRPYGYIEGRSTKVCAVPTVQTSNLPDLNTSASPSALFQQPFSDFQQVQLRAQIFVYGSLIQGMAPDEALPTGCLTVMNCVELIDGGRSVWDNVWRVAVERFHNQKSPLSNPETPQQSRSGAKAPEQATRQSALQSIALPSPVGRAGSKGTPSAIINPVIPLSSPLWNMSTPSRDGSQPNSMPRGPFLDSHQALSPLQPYQSPHIRNYVGHTTPWLSQPSSPRPWIVSPQTSALDAGAHYSALPITETVHVTSIRESFVPRPSGMKLAPPSPLVHSGGPMSVFTGTAPLVEAKKTVSPAKHASVDTKSRKRKKIPTSEEIGQICSPAQAETEPILAPDVTTHLSTSTAITTPGSSAPKSTPGNFTVDISPMSSAHYQITGGRDTEQGLVFSEEMCSKVEQAKLHAEDATAFAAAAVRHSQGIWSKLADQKNSGLVSDVEAKLASAAVAVAAAASVAKAAAAAAKVASDAALQAKLMADEALVSSRTGNPIQSTETSFDVNNLGRVTPASILKGKDRTNSSSSSSIIVAAREAAKKRVEAASAATKRAENLSAVVKAAELAAEAITQAGTVIAMGDPLPLTMSELVEAGPEGYWKRQQVSSDLLVESNSRNKGEQTNIDGVVEGLYAKHFNKQPSNKKEAKSIYQGKRASSKEMARESVEDHVGLVKGMLWDPGTSTEKQLGGQKSSKVSDSAKTIGVVPESEIGTEFASTTVQNEDCEGHQPVRTSKENSIREGSLVEVLSDEDGLRRVWFSAKVLSLKDEKAYVCYTELPPNEDSGKLEWVAINGEGDNAPKVRIAHPMTTMKFEGTRKRRRGATGDYAWSVGDRVDAWIRDGWWEGIITEKSKEDETTLTIQFPDQGDTSIVRAWDLRPSLVWKDEQWMEWSSPRENNCYPHKGDTPQEKRLKLGSYGAVDPAVETRGKDKMSKSIAIEESGKLEESRSLALSAKEKIFNVGKNIREENTSNALRTKRTGLQKEGSRVIFGVPKPGKKRKFMEVSKHYVADRGGKINEGNDPIKFAKYLIPQGSGSRGWKNTSKVVSKEKRPAESKPKVLKSGKPQSVPSRGLPQKDNSLTSAVSNDGSVRDHLPNVKASVSHDESMPGKQNLIDIGPFPNPHKAAEGQVLFSLSGLPTDSTSSEKKSSSAVETDWVNRGKLAPSGAKLARIEEKDTGQNDYPGKSIPEVVEPRRSNRRIQPTSRLLEGLQSSLIVSKIPAVPHDKGKLSRNQDPPTASFRKKFISTGDSWLHYYLM 2374
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 860 874 - -
Tesi1g00380 2374 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 1 2346 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 916 964 - -
Tesi1g00380 2374 Coils Coil 1655 1675 - -
Tesi1g00380 2374 CDD Tudor-Agenet-FMRP-like-rpt2 1948 1996 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 1801 1817 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 1423 1444 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 850 877 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 912 977 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 1048 1089 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 2185 2206 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 191 205 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 1468 1487 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 2152 2211 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 1423 1442 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 189 216 - -
Tesi1g00380 2374 SMART agenet-At-2 1944 2002 IPR014002 -
Tesi1g00380 2374 SMART agenet-At-2 1854 1917 IPR014002 -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 712 732 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 1798 1818 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 2160 2175 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 2294 2318 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 1066 1089 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 233 261 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 1231 1256 - -
Tesi1g00380 2374 MobiDBLite consensus disorder prediction 1760 1780 - -
Tesi1g00380 2374 Pfam Agenet domain 1859 1920 IPR008395 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi1g00380 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr1:7531889 Tesi4g01035 Tesi-Chr4:43964762 dispersed
Tesi Tesi-Chr1:7531889 Tesi1g00924 Tesi-Chr1:21024237 wgd
Tesi Tesi-Chr1:7531889 Tesi21g00647 Tesi-Chr21:13511169 wgd
Tesi Tesi-Chr1:7531889 Tesi22g00288 Tesi-Chr22:21056492 wgd