AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi1g00382 ATGGGAGGCGTAGTGAAGTACGGAATCATAGGGGTTGGAATGATGGGAAGAGAACACCTCATCAACTTATCCCATCTCCGCTCCGAAGGTGTCGCCGTCGTCTCCATCGCCGACCCCCACATCCCTTCCCAGCAACTTGCCCTAAATTTAGCTCACTCCTTTAATTGGCCTTTAAAGGTTTTCTCAGGACACTGGGAACTACTAGAAAGCGGGCTTTGCGATGTAGTGGTCGTGTCAACTCCAAACATGACTCATTATCAAATTCTTATGGATATCATCAACCACCCCAAACCCCATCATGTACTTGTAGAAAAGCCGTTGTGCACCACAGTTGCTGAATGCAAAAAGATTGAAGAATATGAGAAAGAGAAAGGGGTTTACTGGTTACCTCTTGGTTCCGCCGGCGGTCGCCTTTCATTGCCGGATGTTTACAGGTTGATTTGGGGTAAGATGCCTCTAGATGTTGGGAACAATGCCAAGAATACGAGTAAAAGTTGGCATATGTGTGCAAAAATTGTTAGCTTCTTGTTGGAAGCTGCTTCCCATTCTGATGCAAGTATTCCTCAGAGTGTCGTAGATGCTGCTAGAAAGAGGCAGGAGATACTGGTACAAGTTGGGCTGGAGTACAGATACATGCCACCTGTTGCTAAGCTGATAGAAATAGTTAAGGGTGGAATACTTGGACAAGTCAAAATGGTGGCAATCCGTGAACATCGGTTTCCTTTTTTGGTTAAGGTCAACAATTGGAACCGGTTCAACTGTAACTCAGGGGGAACTTTGGTGGAGAAGTGCTGCCACTTTTTTGATCTAATGAGGCTTTTTGTAGCTGCAAATCCAGTTCGAGTGATGGCTTCTGGAGCTATTGATGTTAATCACAAGGATGAAATTTATGATGGAAAGGTACCCGATATCATTGATAATGCATTTGTTATCATTGAATTTGATAATGGTTCTCGGGGGATGCTCGACCTTTGCATGTTTGCTGAAGGGAGTAAAAATGAGCAAGAAATATCGGTAGTTGGTCACATTGGGAAGGGCGAGGCCTTTGTTCCTGAGAATGTGGTGTGTTTCGGTACTCGGTTAGCGGGGAGAGATGGAGTCCAAACTTTGAAAGCCGAGGATAAACGAATAAAATACGATGGACTGCATCATGGGTCAAGTTATTTGGAACACCTTAACTTCTTGTCTGCTGTTAGAGCTCAAGGTGTACAAGCCCCTGCTGTGGATTTGCAGGATGGGTTGCTCTCGGTTGCCATGGGAGTTGCAGCCCAGCTTTCAATTGAAAAGGGCCGCTTTGTTACAATTGAAGAAGTCATGGATGAACAGAAATGTAACTCTTCTGCTTGA 1347 44.91 MGGVVKYGIIGVGMMGREHLINLSHLRSEGVAVVSIADPHIPSQQLALNLAHSFNWPLKVFSGHWELLESGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVAECKKIEEYEKEKGVYWLPLGSAGGRLSLPDVYRLIWGKMPLDVGNNAKNTSKSWHMCAKIVSFLLEAASHSDASIPQSVVDAARKRQEILVQVGLEYRYMPPVAKLIEIVKGGILGQVKMVAIREHRFPFLVKVNNWNRFNCNSGGTLVEKCCHFFDLMRLFVAANPVRVMASGAIDVNHKDEIYDGKVPDIIDNAFVIIEFDNGSRGMLDLCMFAEGSKNEQEISVVGHIGKGEAFVPENVVCFGTRLAGRDGVQTLKAEDKRIKYDGLHHGSSYLEHLNFLSAVRAQGVQAPAVDLQDGLLSVAMGVAAQLSIEKGRFVTIEEVMDEQKCNSSA 448
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi1g00382 448 Gene3D - 4 132 - -
Tesi1g00382 448 PANTHER - 189 441 IPR050424 -
Tesi1g00382 448 Gene3D Dihydrodipicolinate Reductase; domain 2 208 447 - -
Tesi1g00382 448 Pfam Oxidoreductase family, C-terminal alpha-beta domain 220 434 IPR004104 -
Tesi1g00382 448 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 213 351 - -
Tesi1g00382 448 Pfam Oxidoreductase family, NAD-binding Rossmann fold 6 126 IPR000683 GO:0000166(InterPro)
Tesi1g00382 448 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 128 IPR036291 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi1g00382 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr1:7621151 Tesi2g02067 Tesi-Chr2:49437312 dispersed