AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi1g00414 ATGAGCTGGTTAGGAAAACTAGGGTTAGGGTTTGGTAACAGAGCCACTGATTTCTCCATGAAATCTTCTTCTTCTTCATCGATTCCTCAAGGTCCCGACGACGATATCCCTGCGCCGGGACAGCAGTTCGGTCAATTCGGTGCCGGGTGCTTCTGGGGCGTTGAATTAGCGTTTCAGAGAGTTTCGGGCGTTACGAAAACGGATGTTGGGTACAGTCAAGGGTTTCTGCACAATCCGATTTACAACGATATCTGTTCGGGGACGACGAATCATTCGGAGATTGTTAGAGTTCAGTACGATCCGAAGGAGTGCAGTTTTGAGAATTTGCTCGATGTTTTTTGGGCTCGGCACGATCCAACCAAGCTCAATCGTCAGAATCCTCCTGTCATGAAGGGGAGTGATGTGGGTACACAGTACAGATCAGGAATATACTTCTACACACCTGAGCAGGAGAAAGCGGCACGGGAGTCTATGGAACAACAGCAGAAGCTCTTGAATAGAAAGATTGTTACTGAGATTCTGCCTGCCAAGAAGTTCTACTACGCGGAGGAATACCACCAACAATACCTTGCAAAAGGGGGCCGATTTGGTTTCAAGCAGTCAGCTGGGAAAGGCTGCAATGATCCAATCCGATGCTATGGCTAA 645 48.22 MSWLGKLGLGFGNRATDFSMKSSSSSSIPQGPDDDIPAPGQQFGQFGAGCFWGVELAFQRVSGVTKTDVGYSQGFLHNPIYNDICSGTTNHSEIVRVQYDPKECSFENLLDVFWARHDPTKLNRQNPPVMKGSDVGTQYRSGIYFYTPEQEKAARESMEQQQKLLNRKIVTEILPAKKFYYAEEYHQQYLAKGGRFGFKQSAGKGCNDPIRCYG 214
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi1g00414 214 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 25 212 IPR050162 GO:0005737(PANTHER)|GO:0008113(PANTHER)|GO:0034599(PANTHER)|GO:0036456(PANTHER)
Tesi1g00414 214 Pfam Peptide methionine sulfoxide reductase 46 192 IPR002569 GO:0008113(InterPro)
Tesi1g00414 214 SUPERFAMILY Peptide methionine sulfoxide reductase 38 204 IPR036509 GO:0008113(InterPro)
Tesi1g00414 214 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 41 204 IPR002569 GO:0008113(InterPro)
Tesi1g00414 214 MobiDBLite consensus disorder prediction 20 39 - -
Tesi1g00414 214 FunFam Peptide methionine sulfoxide reductase 31 214 - -
Tesi1g00414 214 Gene3D Peptide methionine sulphoxide reductase MsrA 26 214 IPR036509 GO:0008113(InterPro)
Tesi1g00414 214 NCBIfam peptide-methionine (S)-S-oxide reductase MsrA 45 192 IPR002569 GO:0008113(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi1g00414 K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr1:8312628 Tesi1g00875 Tesi-Chr1:19629032 wgd
Tesi Tesi-Chr1:8312628 Tesi21g00729 Tesi-Chr21:16037756 wgd