AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi1g00420 | ATGGCAGTGACAGTTAGCTTCTCTTCTTGTCTTCTGTGTTTTGTACTTCTCTTACCTGTGCTGTGTAGTTCTCAGGACACTTTCTTGTGCTCCAGAGCAACATATTATGGTAGCCCTGATTTCTTAGGGACTCCAACTGGAGCATGTGGATTTGGTGAATTTGGAAGAAATGTCAATGGTGGAGATGTAGGAGCTGTTTCTCGGCTGTACAGGAACGGCACCGGTTGTGGAGCATGCTATCAGGTTAGGTGCACGATACCGCAACTCTGCGATGACGCCGGGGTGAAGATAGTGGTCACCGACCACGGTGAAGGCGACTACACCGACTTTATCCTCAGCACTCGCGGATTCACGAAGTTGGCTCGTCCCAACATGGCCGCAGAATTGGTGGCTCATGGTGTGGTCGACATAGAATATAGGAGGATTTCATGCCAGTATCCAGGGTACAACCTTGTGTTTAAGGTCCATGAACATAGCAGGTTTCCGGAATATTTAGCCATAGTTGTCTTGTACCAAGCTGGCCAAAAAGACATTGTAACCATTGAAGTGTGGCAGGAGGATTGTCAGCAGTGGAGGAGTTTGCGCAGGGCATATGGCGCGGTCTGGGACATGACGAACCCGCCCAGAGGCGCGGTTAACTTGAGGTTCCAACTGAGCGGAGACGACTCGAAGTGGGTACAGCTGAGGAATGCGATCCCTAGTGACTGGAAGGCTGGAGTTGCCTATGACTCGGCCATTCAGATCTCTAATTAA | 753 | 50.2 | MAVTVSFSSCLLCFVLLLPVLCSSQDTFLCSRATYYGSPDFLGTPTGACGFGEFGRNVNGGDVGAVSRLYRNGTGCGACYQVRCTIPQLCDDAGVKIVVTDHGEGDYTDFILSTRGFTKLARPNMAAELVAHGVVDIEYRRISCQYPGYNLVFKVHEHSRFPEYLAIVVLYQAGQKDIVTIEVWQEDCQQWRSLRRAYGAVWDMTNPPRGAVNLRFQLSGDDSKWVQLRNAIPSDWKAGVAYDSAIQISN | 250 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi1g00420 | 250 | SUPERFAMILY | PHL pollen allergen | 150 | 244 | IPR036749 | - | |
| Tesi1g00420 | 250 | CDD | DPBB-EXLB-N | 31 | 144 | - | - | |
| Tesi1g00420 | 250 | Pfam | Expansin C-terminal domain | 153 | 233 | IPR007117 | - | |
| Tesi1g00420 | 250 | SUPERFAMILY | Barwin-like endoglucanases | 13 | 148 | IPR036908 | - | |
| Tesi1g00420 | 250 | PRINTS | Expansin-Lol pI family signature | 27 | 42 | IPR007118 | GO:0005576(InterPro) | |
| Tesi1g00420 | 250 | PRINTS | Expansin-Lol pI family signature | 191 | 205 | IPR007118 | GO:0005576(InterPro) | |
| Tesi1g00420 | 250 | PRINTS | Expansin-Lol pI family signature | 230 | 244 | IPR007118 | GO:0005576(InterPro) | |
| Tesi1g00420 | 250 | PRINTS | Expansin-Lol pI family signature | 132 | 148 | IPR007118 | GO:0005576(InterPro) | |
| Tesi1g00420 | 250 | PRINTS | Expansin-Lol pI family signature | 66 | 84 | IPR007118 | GO:0005576(InterPro) | |
| Tesi1g00420 | 250 | Gene3D | - | 20 | 144 | IPR036908 | - | |
| Tesi1g00420 | 250 | Gene3D | - | 145 | 245 | IPR036749 | - | |
| Tesi1g00420 | 250 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 46 | 149 | IPR007112 | - | |
| Tesi1g00420 | 250 | Pfam | Lytic transglycolase | 67 | 139 | IPR009009 | - | |
| Tesi1g00420 | 250 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 163 | 244 | IPR007117 | - | |
| Tesi1g00420 | 250 | PANTHER | EXPANSIN-B3 | 10 | 249 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi1g00420 | K20628 | expansin |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr1:8387847 | Tesi21g00790 | Tesi-Chr21:18273431 | dispersed | |
| Tesi | Tesi-Chr1:8387847 | Tesi21g00738 | Tesi-Chr21:16356832 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Tesi1g00420 | . | 8 | 250 | Expansin gene family | AT4G17030 | 57.377 | 2.61e-99 | 288.0 | |
| Tesi1g00466 | . | 1 | 247 | Expansin gene family | AT4G17030 | 42.46 | 3.31e-57 | 181.0 | |
| Tesi1g01836 | . | 24 | 247 | Expansin gene family | AT3G15370 | 68.304 | 4.88e-120 | 341.0 | |
| Tesi1g01839 | . | 4 | 247 | Expansin gene family | AT3G15370 | 56.491 | 1.07e-109 | 319.0 | |
| Tesi1g01851 | . | 3 | 154 | Expansin gene family | AT4G28250 | 59.091 | 8.21e-51 | 169.0 | |
| Tesi1g01852 | . | 31 | 197 | Expansin gene family | AT4G28250 | 71.204 | 4.81e-94 | 275.0 | |
| Tesi2g00051 | . | 12 | 254 | Expansin gene family | AT4G38210 | 63.115 | 3.27e-120 | 341.0 | |
| Tesi4g00779 | . | 31 | 153 | Expansin gene family | AT2G45110 | 32.061 | 5.49e-07 | 45.1 | |
| Tesi4g01331 | . | 1 | 249 | Expansin gene family | AT1G69530 | 84.337 | 9.03e-155 | 428.0 | |
| Tesi5g01057 | . | 79 | 264 | Expansin gene family | AT4G38400 | 64.516 | 1.06e-88 | 259.0 | |
| Tesi6g01441 | . | 16 | 252 | Expansin gene family | AT1G20190 | 76.371 | 1.51e-139 | 390.0 | |
| Tesi6g01491 | . | 5 | 264 | Expansin gene family | AT3G45970 | 65.0 | 6.70e-116 | 331.0 | |
| Tesi6g01495 | . | 5 | 264 | Expansin gene family | AT3G45970 | 57.252 | 1.29e-94 | 277.0 | |
| Tesi6g01497 | . | 5 | 264 | Expansin gene family | AT3G45970 | 59.542 | 1.13e-99 | 290.0 | |
| Tesi7g00047 | . | 7 | 253 | Expansin gene family | AT2G40610 | 79.134 | 3.82e-149 | 414.0 | |
| Tesi10g00860 | . | 1 | 250 | Expansin gene family | AT1G69530 | 84.4 | 5.39e-157 | 434.0 | |
| Tesi10g00944 | . | 52 | 256 | Expansin gene family | AT5G39280 | 64.734 | 1.20e-104 | 301.0 | |
| Tesi11g00041 | . | 5 | 253 | Expansin gene family | AT2G40610 | 75.904 | 6.35e-138 | 386.0 | |
| Tesi11g00397 | . | 1 | 257 | Expansin gene family | AT2G39700 | 82.171 | 3.06e-164 | 453.0 | |
| Tesi11g01540 | . | 5 | 241 | Expansin gene family | AT2G03090 | 77.215 | 2.23e-135 | 380.0 | |
| Tesi12g00013 | . | 1 | 252 | Expansin gene family | AT2G03090 | 77.381 | 1.56e-147 | 412.0 | |
| Tesi12g01079 | . | 18 | 253 | Expansin gene family | AT2G40610 | 80.085 | 4.70e-138 | 386.0 | |
| Tesi13g00347 | . | 1 | 257 | Expansin gene family | AT2G39700 | 85.271 | 1.79e-170 | 469.0 | |
| Tesi15g00196 | . | 7 | 170 | Expansin gene family | AT2G45110 | 29.24 | 3.01e-10 | 55.1 | |
| Tesi15g00197 | . | 1 | 163 | Expansin gene family | AT2G45110 | 29.412 | 2.69e-11 | 58.9 | |
| Tesi15g00198 | . | 1 | 153 | Expansin gene family | AT2G45110 | 31.875 | 1.31e-12 | 61.2 | |
| Tesi15g00199 | . | 13 | 151 | Expansin gene family | AT5G56320 | 27.083 | 1.25e-06 | 44.3 | |
| Tesi15g00200 | . | 8 | 148 | Expansin gene family | AT3G15370 | 31.25 | 2.53e-07 | 46.2 | |
| Tesi17g00560 | . | 2 | 260 | Expansin gene family | AT4G28250 | 70.498 | 5.07e-138 | 387.0 | |
| Tesi18g00200 | . | 41 | 259 | Expansin gene family | AT5G39270 | 65.753 | 3.47e-108 | 311.0 | |
| Tesi18g00201 | . | 38 | 256 | Expansin gene family | AT5G39280 | 67.58 | 4.44e-113 | 334.0 | |
| Tesi18g00202 | . | 9 | 256 | Expansin gene family | AT5G39280 | 58.052 | 1.04e-109 | 315.0 | |
| Tesi18g00203 | . | 11 | 252 | Expansin gene family | AT2G03090 | 51.02 | 1.16e-82 | 246.0 | |
| Tesi18g00618 | . | 4 | 253 | Expansin gene family | AT2G03090 | 79.6 | 7.47e-152 | 425.0 | |
| Tesi20g00012 | . | 16 | 255 | Expansin gene family | AT4G01630 | 46.964 | 4.04e-68 | 207.0 | |
| Tesi21g00738 | . | 39 | 250 | Expansin gene family | AT4G17030 | 52.294 | 3.71e-76 | 238.0 | |
| Tesi21g00790 | . | 1 | 247 | Expansin gene family | AT4G17030 | 42.063 | 6.55e-60 | 188.0 | |
| Tesi22g00299 | . | 29 | 273 | Expansin gene family | AT1G65680 | 68.016 | 9.81e-123 | 349.0 | |
| Tesi22g00300 | . | 29 | 273 | Expansin gene family | AT1G65680 | 65.587 | 8.73e-117 | 334.0 | |
| Tesi22g00450 | . | 7 | 262 | Expansin gene family | AT1G12560 | 69.65 | 5.96e-132 | 372.0 | |
| Tesi23g00715 | . | 1 | 250 | Expansin gene family | AT1G69530 | 78.8 | 5.91e-143 | 399.0 | |
| Tesi23g00793 | . | 28 | 257 | Expansin gene family | AT5G39300 | 68.261 | 1.85e-116 | 332.0 |