Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi1g00795 | ATGGCTAAAGTGCGCCAACACCGTAGGTATCACTGTACTGGAGGGGGTCGCCGGCGACGGAATTGCGGCAACGGCCACTTTGAAAATGCCTTCCAAATTGTGGTTACCCTTCTGGCACTGAAGTACCAAGTAGGCAAGATTAAGAATCCCTTTGAGACTCGTCCCTTGTTTATGAATTTTGCCATTCTTTCCATGCTCATCTCCTTTCTATCCCCTCCAAAGAAACTCCCTTTCATTTCAGTCCATATGGCACGTATCGTCGGCGAAACCCAACTTCTCCTGAGGGATCTGGCTTTGTCTATGTTTAGCTCACTTCTTCTGTCACAAAACCTCTCATGCCCTGCCTTCCTCTTATGCATTCCCTCTTTGTACGCTCTACTCAAACCCTGCTATAGGTGGCTTCACAAGACGGAAGCCATGCAGTACGTGCTCTCTAAGCTTGGCCTTACTGATGACAAAACATCCCACGAGGACCCAGAGCGATCCACCGACTCGGTTACTGTTGAATTCCCAAATGTGGACACTGCAAGTTCAACATTACCGGAGATCGGTCCTCTCGATCGGAAGAGGATCAATGATGCCTTAGATAAGCACCTCGAGAAATCGTCGCCGTCGACGTCTAAGAGATTGAACGGCAAGGAGAAGGGAAGATTATCCGTTCCATCCACCTCCATCGGCAAGCCACCACCGGATCACCGGGACACTCGTTCAGCTTCTCTCTCCAAGAACAAATGCTCGGAAGAGGAGTCTGAAACAGACAGTGAAGAGTCAGATGTTAGTGGTTCAGATGGGGATGACACATCTTGGATCTCATGGTTTTGCAATCTGCGAGGGAATGAATTCTTCTGCGAAGTTGATGATGAGTACATTCAAGATGATTTTAACCTTTGCGGGTTAAGCAGTCAAGTTCCTTACTATGATTATGCACTCGATTTGATTTTGGATGTTGAATCCTCTCACGGTGATATGTTCACTGAGGAACAAAATGAATTGGTCGAATCGGCAGCAGAGATGCTGTATGGTCTGATTCATGTCCGTTACATACTAACTAGCAAAGGAATGTCCGCAATGGTTGCTTGGAAGGTGTTCTTAGGAAGGGCACAGGGATCCGATTGTCATGCATCTTCAGTATGTGATGACACTTTGGTGTTTGTGGATGGTTCAATGGAGCAGGTTGTGAATTTTAGAGCAGTATTGATATGTTTTGAGGCGGTGTCGGGCCTTCGTGTAAACTTGTCAAAGTACCATTGTCAGAGGGCGTTAGATGCAGAGCGATATCTTAGCTTGTTGTGCCTAGGTTCTGAGTAG | 1308 | 46.94 | MAKVRQHRRYHCTGGGRRRRNCGNGHFENAFQIVVTLLALKYQVGKIKNPFETRPLFMNFAILSMLISFLSPPKKLPFISVHMARIVGETQLLLRDLALSMFSSLLLSQNLSCPAFLLCIPSLYALLKPCYRWLHKTEAMQYVLSKLGLTDDKTSHEDPERSTDSVTVEFPNVDTASSTLPEIGPLDRKRINDALDKHLEKSSPSTSKRLNGKEKGRLSVPSTSIGKPPPDHRDTRSASLSKNKCSEEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMSAMVAWKVFLGRAQGSDCHASSVCDDTLVFVDGSMEQVVNFRAVLICFEAVSGLRVNLSKYHCQRALDAERYLSLLCLGSE | 435 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi1g00795 | 435 | MobiDBLite | consensus disorder prediction | 151 | 264 | - | - | |
| Tesi1g00795 | 435 | Gene3D | protein kinase ck2 holoenzyme, chain C, domain 1 | 262 | 361 | IPR016149 | GO:0005956(InterPro)|GO:0019887(InterPro) | |
| Tesi1g00795 | 435 | SUPERFAMILY | Casein kinase II beta subunit | 266 | 358 | IPR035991 | GO:0005956(InterPro)|GO:0019887(InterPro) | |
| Tesi1g00795 | 435 | Pfam | Casein kinase II regulatory subunit | 268 | 359 | IPR000704 | GO:0005956(InterPro)|GO:0019887(InterPro) | |
| Tesi1g00795 | 435 | PRINTS | Casein kinase II regulatory subunit family signature | 340 | 361 | IPR000704 | GO:0005956(InterPro)|GO:0019887(InterPro) | |
| Tesi1g00795 | 435 | PRINTS | Casein kinase II regulatory subunit family signature | 268 | 284 | IPR000704 | GO:0005956(InterPro)|GO:0019887(InterPro) | |
| Tesi1g00795 | 435 | PRINTS | Casein kinase II regulatory subunit family signature | 285 | 299 | IPR000704 | GO:0005956(InterPro)|GO:0019887(InterPro) | |
| Tesi1g00795 | 435 | PANTHER | CASEIN KINASE II SUBUNIT BETA | 248 | 358 | IPR000704 | GO:0005737(PANTHER)|GO:0005956(InterPro)|GO:0005956(PANTHER)|GO:0019887(InterPro)|GO:0019887(PANTHER) | |
| Tesi1g00795 | 435 | SMART | CK-II-beta-2 | 268 | 396 | IPR000704 | GO:0005956(InterPro)|GO:0019887(InterPro) | |
| Tesi1g00795 | 435 | FunFam | Casein kinase II subunit beta | 261 | 362 | - | - | |
| Tesi1g00795 | 435 | MobiDBLite | consensus disorder prediction | 165 | 179 | - | - | |
| Tesi1g00795 | 435 | MobiDBLite | consensus disorder prediction | 186 | 215 | - | - | |
| Tesi1g00795 | 435 | MobiDBLite | consensus disorder prediction | 229 | 249 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi1g00795 | K03115 | casein kinase II subunit beta |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr1:17546232 | Tesi21g00747 | Tesi-Chr21:16658027 | dispersed | |
| Tesi | Tesi-Chr1:17546232 | Tesi1g00796 | Tesi-Chr1:17588166 | tandem | |
| Tesi | Tesi-Chr1:17546232 | Tesi22g00239 | Tesi-Chr22:19544013 | wgd |