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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi1g00801 ATGACCATCGCATTCATTTGGGCTCCAAGATCGTTGAAGGATATGGCTGACCTATTGGCTAAAGGAGGGGCGGGAAGAGATGATCTTGTCAGTGGTGCAAATCTCCTGATTAGCCTTATATCCTTTGTTTTCTCCCCTTCATGGGACGTTATCAATATGGCAACCCTTAGAAATCTTAAAATCAAAACTGGCACCTGCAAACGCATCATTAAAGAGCTACATTCCTATGAGAAAGAAGTTGAAAGAGAAGCTGCAAAGACTGCTGATATGAAGGAGAAAGGAGCTGACCCTTATGACCTTAAGCAACAGGAAAACGTGTTGGCTGAATCTAGGATGATGATTCCTGATTGCAACAAGCGCCTGGAGGCCTCACTAGCCGACCTAAAAGGAACTTTGGTATTGTATCTCTAA 411 43.55 MTIAFIWAPRSLKDMADLLAKGGAGRDDLVSGANLLISLISFVFSPSWDVINMATLRNLKIKTGTCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCNKRLEASLADLKGTLVLYL 136
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi1g00801 136 SUPERFAMILY Tubulin chaperone cofactor A 55 132 IPR036126 GO:0007021(InterPro)|GO:0007023(InterPro)|GO:0048487(InterPro)
Tesi1g00801 136 Gene3D - 50 135 - -
Tesi1g00801 136 PANTHER TUBULIN-SPECIFIC CHAPERONE A 52 132 IPR004226 GO:0005829(PANTHER)|GO:0006457(PANTHER)|GO:0007021(InterPro)|GO:0007021(PANTHER)|GO:0007023(InterPro)|GO:0015630(PANTHER)|GO:0015631(PANTHER)|GO:0048487(InterPro)
Tesi1g00801 136 Coils Coil 66 93 - -
Tesi1g00801 136 FunFam Tubulin-specific chaperone A 53 135 - -
Tesi1g00801 136 Pfam Tubulin binding cofactor A 55 132 IPR004226 GO:0007021(InterPro)|GO:0007023(InterPro)|GO:0048487(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi1g00801 K17292 tubulin-specific chaperone A
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr1:17788831 Tesi22g00254 Tesi-Chr22:20166095 dispersed