Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi1g00875 | ATGGACACGTCTTCTTCTTCGTCAATCGCCCAAGGTCCTGACAACGATACCCCTGAGCCAGGGCAGCAGTTCTCTCAATTTGGTGCCGGATGCTTCTGGGGCGTCGAATTAGCGTTCCATAGAGTTCCGGGAGTTACGAAGACTGAAGTTGGGTACAGTCAAGGGTTTTCGCATAATCCAACCTACAAAGATGTTTGTTCGGGCAAGACGAATCATTCCGAGATTGTTAGGGTTCAGTACGATCCGAAGCAGTGCAGCTATGAGAATTTGCTTGATGAGTTCTGGGCTCGGCATGATCCTACTACGCTTAATCGTCAGGGAAATGATGTGGGTACGCAGTACAGATCAGGAATGTACTTCTACACACCTGAGCAGGAGAAAGCAGCACAGGAGTCTATGGAACAACATCAGAAGCTCGTGACCAGGAAGAAGATCGTTACTGAGATTCTGCCTGCGAAGAAATTCTACAGAGGGGAGGAATACCACCAGCTATACCTTGCAAAAGGGGACCGATCTGGTTTGAAGCAGTCAACTGATAAAGGCTGCAACGATCCGATCCGATGCTATGGCTAA | 573 | 48.69 | MDTSSSSSIAQGPDNDTPEPGQQFSQFGAGCFWGVELAFHRVPGVTKTEVGYSQGFSHNPTYKDVCSGKTNHSEIVRVQYDPKQCSYENLLDEFWARHDPTTLNRQGNDVGTQYRSGMYFYTPEQEKAAQESMEQHQKLVTRKKIVTEILPAKKFYRGEEYHQLYLAKGDRSGLKQSTDKGCNDPIRCYG | 190 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi1g00875 | 190 | Gene3D | Peptide methionine sulphoxide reductase MsrA | 7 | 190 | IPR036509 | GO:0008113(InterPro) | |
| Tesi1g00875 | 190 | FunFam | Peptide methionine sulfoxide reductase | 12 | 190 | - | - | |
| Tesi1g00875 | 190 | Pfam | Peptide methionine sulfoxide reductase | 27 | 169 | IPR002569 | GO:0008113(InterPro) | |
| Tesi1g00875 | 190 | NCBIfam | peptide-methionine (S)-S-oxide reductase MsrA | 26 | 169 | IPR002569 | GO:0008113(InterPro) | |
| Tesi1g00875 | 190 | SUPERFAMILY | Peptide methionine sulfoxide reductase | 19 | 171 | IPR036509 | GO:0008113(InterPro) | |
| Tesi1g00875 | 190 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Tesi1g00875 | 190 | Hamap | Peptide methionine sulfoxide reductase MsrA [msrA]. | 22 | 180 | IPR002569 | GO:0008113(InterPro) | |
| Tesi1g00875 | 190 | PANTHER | MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE | 7 | 188 | IPR050162 | GO:0005737(PANTHER)|GO:0008113(PANTHER)|GO:0034599(PANTHER)|GO:0036456(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi1g00875 | K07304 | peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr18:33159784 | Tesi1g00875 | Tesi-Chr1:19629032 | dispersed | |
| Tesi | Tesi-Chr1:8312628 | Tesi1g00875 | Tesi-Chr1:19629032 | wgd | |
| Tesi | Tesi-Chr1:19629032 | Tesi21g00729 | Tesi-Chr21:16037756 | wgd |