AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi1g00906 ATGAGGCACGGTGATCGGATCGACAGCGTAGAATTGCTGTGGGTATCAACGGCAGCTAGGCCGTGGGATCCACCACTGGCCGACGCCGGTAGGGTTAGAGCGTTCTGCACCGGGAAGAAACTCCGAAACAATCTGGATTTTCCGATCCACCGAGTGTTCGTTTCACCTTTCCTTCGATGCATTCAGACAGCTTCGGAGGTCATCTCAGCTCTCTGCGCCATCGACAATAGCTCTGTCGAGATGACTGGTGAAAACGTAGCGATCGATTCCTCCAAGCTTAAGGTATCAATTGAGTATGGATTGAGTGAGGTCTTAAGTAGGGAAGCTATAACACTTGATTTGGCTCCCAAAGATGGGAACTGGGGCTTCAATATCTCAGAGCTTGAAGCTATGTTGCCCGCTGGGACAGTTGATCATTCTGTGGAAAGCGTGTACCAAGAGTTGCCACAGTGGGAGGAGTCAGTGATGGATGCACGGGCTAGATACGAACATGTTATTCGAGCACTTGCAGATAAATTTCCTTCCGAAAACTTGTTGCTTGTCACACATGGTGAAGGAGTTGGGGTTGCAATATCTGCATTCTTGAGTGACACAATTGTGTATGAAGTAGACTATTGTGGATATTCACACTCACAAAGACTAATCTCCTTCGGCCCAAGCCAGGAATTTACTGCCAGAAACTTGGATGTAGTCACGAAGAACGGCCAAACTGGTATCTGCTACTGCCCCACAAGCACCTTGACCCTTGATGTATGA 756 48.41 MRHGDRIDSVELLWVSTAARPWDPPLADAGRVRAFCTGKKLRNNLDFPIHRVFVSPFLRCIQTASEVISALCAIDNSSVEMTGENVAIDSSKLKVSIEYGLSEVLSREAITLDLAPKDGNWGFNISELEAMLPAGTVDHSVESVYQELPQWEESVMDARARYEHVIRALADKFPSENLLLVTHGEGVGVAISAFLSDTIVYEVDYCGYSHSQRLISFGPSQEFTARNLDVVTKNGQTGICYCPTSTLTLDV 251
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi1g00906 251 FunFam Phosphoglycerate mutase family protein 1 217 - -
Tesi1g00906 251 PANTHER UBIQUITIN-ASSOCIATED AND SH3 DOMAIN-CONTAINING BA-RELATED 1 232 IPR051710 -
Tesi1g00906 251 Pfam Histidine phosphatase superfamily (branch 1) 144 195 IPR013078 -
Tesi1g00906 251 Pfam Histidine phosphatase superfamily (branch 1) 19 70 IPR013078 -
Tesi1g00906 251 SUPERFAMILY Phosphoglycerate mutase-like 1 207 IPR029033 -
Tesi1g00906 251 PIRSF PRIB5 1 250 IPR012398 -
Tesi1g00906 251 Gene3D - 1 214 IPR029033 -
Tesi1g00906 251 CDD HP-PGM-like 1 210 IPR013078 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi1g00906 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr1:20604723 Tesi21g00667 Tesi-Chr21:14144062 wgd