AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi1g00907 ATGGTGAAAGCAGTCAGAGTTCATGAAATTGGTGGACCAGAGGTTCTGAAGTGGGAGGATGTGGAGGTAGGAGAGCCTAACGAGGGTGAGATCCGTGTAAAAAATAAGGCGATTGGGCTCAATTTCAATGACATATATTTTCGCACAGGAGTTTACAAAGCTCCTACATTTCCATTTATCCCAGGAAGGGAGGCAGCTGGAGTGGTGACAGCCGTGGGCCCTGGAGTAACTGGCAGAAAAATTGGGGATCTCGTTGCTTATGCTGGTAATCCAATGGGTTCGTATACTGAAGAGCAGATTCTCCCCGCAAGAGTTGCGGTGCCTGTTCCACCATTTATAGATCCTATTATTGCAGCATCCATCATGGTTAAGGGTATGACAGCTCATTTCCTAGTCCATCGGTGCTTCAAGCTCGAACGTGGACACACGGTACTTGTTCATGCAGCAGCTGGAGGAGTTGGGTCTCTGTTGTGCCAGTGGGCTAACACTCTTGGTGCCACTGTCATTGGAACTGTGTCAAATGAGGAGAAGGCAGACCAAGCTAAAGAGGATGGATGCCATTATGTCATAATCTACACGCAAGAGGATTTTGTAGCCGCTGTCAACAAGATAACATCAGGCAGAGGAGTTGATGTTGTCTACGATTCTGTGGGAAAAGATACATTCCAGGGATCGTTGGCGTGTTTAAAGACTCTTGGATACATGGTGAACTTTGGGCAGTCGTCTGGTATGCCTGATCCAGTTCCATTGTCAGCTCTTGCCACGAAATCCCTCTTCTTGACAAGGCCATTACTCATGCAGTATACAGCAACTCGAGACGAGCTACTGGAAGCAGCAGGAGATGTGTTTGCCAATGTTGCATCGGGTGTATTAAAAGTCCGTGTTAACAACACATACCTTCTTTCGCAGGTAGCACAGGCTCATGCAGACCTTGAAAGTCGGAAAACATCTGGATCTGTAGTGTTGATACCAGATGGTACTGAGCTCCCAAATGGTGTTCATTTCATGCCGCCCAAATGGTGGGTGACGGAAGCCTTTGTGAGGAGGGGAATGGAGGCAGTTGGAGTGGTGACTGCCATTGGCCCTGGACTAACCGGAGGGAAAATTGGGGATCTTGTTGCATATGCTGGTAAACCGGGCTCACACGTCGAAGAACAGATCCTTGGCTCATACGCTGAACAACAGATCCTTCCTGCAAGCGTCGTGGTGCCTGTCCCACCTTCTATTGATCCTATCATCGCAGCATCCGTCATGCTTAAGGGTATGACAGCTCGGTGCCTACTCCGCCATTGCTTCAAGGTTGACTCCTTTCATCTGGATCTTAAGAATCTTCCATTGCAAGATCGAAATTTTGTTCTCTTTCTATATGCTCTAGTTTTCATAGTGATGCAGGTTGAACCTGGGCACACAGTCCTTGTCCATGCAGCAGGTGGAGGAGTTGGGTCTCTATTGTGCCAATGGGCTAATGCTCTTGGTGCCACTGTCATTGGAATCATGTCAAATGAGGAGAAGGCGGCCCAAGCCAAGGAGGATGGATGCCATTACGTCATAATCTACAGCAAAGAGGATTTTGTCATCACTGTCAACAAGATAACATTAGGCAAAGGAGTTGATGTGGTCTACGATTCTGTGGGGAAAGATACATTCCAGGGATCATTAGCATGCTTGAAGCCTCGTGGCCACATGGTGAGCTTTGGGCAGGTTTCTGGTATACCAGACCCAGTTCCGTTGTCAGCTCTTGCCGTGAAATCCCTGTTCTTGACGAGGCCAGCGCTCCTGCAATATACAGCAACTCGAGATGAGCTTCTGGAAGCTGCTAGAGAGGTGTTTGCTAATGTTGCATCAGGTGTGTTGCGAGTTCGTGTTAACAATACATACCTTTTGTCCAATGCAGCGCAGGCTCATGAAGATCTTGAGAGTCGGAAAACATCTGGATCTGTAGTTTTGATACCAGACGATACTGATCCGTTTTTGGACTGCGGGTCAGGGTCTTATCTTTTTAACCCGATTATAATTGGGGTTTTGAACAATACTGTAATCAATGAATATGATGCTTGCAAGTACGATTTCCAAGCAGAGCTAGCTTTGTTCGGTCTTTTGTTTGACAGCATGTTGTACAGTTTAACCAGCAAGTTTGGGAAGGATGGTATGGTGGTTTCTCCACGCCTAGGACTCCAGAAGATCATTCTATGA 2193 47.24 MVKAVRVHEIGGPEVLKWEDVEVGEPNEGEIRVKNKAIGLNFNDIYFRTGVYKAPTFPFIPGREAAGVVTAVGPGVTGRKIGDLVAYAGNPMGSYTEEQILPARVAVPVPPFIDPIIAASIMVKGMTAHFLVHRCFKLERGHTVLVHAAAGGVGSLLCQWANTLGATVIGTVSNEEKADQAKEDGCHYVIIYTQEDFVAAVNKITSGRGVDVVYDSVGKDTFQGSLACLKTLGYMVNFGQSSGMPDPVPLSALATKSLFLTRPLLMQYTATRDELLEAAGDVFANVASGVLKVRVNNTYLLSQVAQAHADLESRKTSGSVVLIPDGTELPNGVHFMPPKWWVTEAFVRRGMEAVGVVTAIGPGLTGGKIGDLVAYAGKPGSHVEEQILGSYAEQQILPASVVVPVPPSIDPIIAASVMLKGMTARCLLRHCFKVDSFHLDLKNLPLQDRNFVLFLYALVFIVMQVEPGHTVLVHAAGGGVGSLLCQWANALGATVIGIMSNEEKAAQAKEDGCHYVIIYSKEDFVITVNKITLGKGVDVVYDSVGKDTFQGSLACLKPRGHMVSFGQVSGIPDPVPLSALAVKSLFLTRPALLQYTATRDELLEAAREVFANVASGVLRVRVNNTYLLSNAAQAHEDLESRKTSGSVVLIPDDTDPFLDCGSGSYLFNPIIIGVLNNTVINEYDACKYDFQAELALFGLLFDSMLYSLTSKFGKDGMVVSPRLGLQKIIL 730
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi1g00907 730 Gene3D - 420 595 - -
Tesi1g00907 730 Pfam Alcohol dehydrogenase GroES-like domain 28 110 IPR013154 -
Tesi1g00907 730 SMART PKS-ER-names-mod 11 322 IPR020843 GO:0016491(InterPro)
Tesi1g00907 730 FunFam Quinone oxidoreductase 1 124 268 - -
Tesi1g00907 730 Gene3D - 350 649 - -
Tesi1g00907 730 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 114 274 IPR036291 -
Tesi1g00907 730 CDD QOR2 350 651 IPR047618 GO:0003960(InterPro)
Tesi1g00907 730 SUPERFAMILY GroES-like 2 145 IPR011032 -
Tesi1g00907 730 FunFam Quinone oxidoreductase 1 452 595 - -
Tesi1g00907 730 Gene3D - 124 268 - -
Tesi1g00907 730 SUPERFAMILY GroES-like 334 434 IPR011032 -
Tesi1g00907 730 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 456 601 IPR036291 -
Tesi1g00907 730 PANTHER QUINONE OXIDOREDUCTASE PIG3-RELATED 3 324 - GO:0003960(PANTHER)|GO:0005829(PANTHER)|GO:0016651(PANTHER)|GO:0017091(PANTHER)|GO:0070402(PANTHER)
Tesi1g00907 730 Pfam Zinc-binding dehydrogenase 152 262 IPR013149 -
Tesi1g00907 730 Pfam Zinc-binding dehydrogenase 479 587 IPR013149 -
Tesi1g00907 730 CDD QOR2 3 324 IPR047618 GO:0003960(InterPro)
Tesi1g00907 730 Gene3D - 11 318 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi1g00907 K00344 NADPH:quinone reductase [EC:1.6.5.5]