AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi1g00912 ATGTGGTCTGCGAGAGAGATGGTTCTATCGCAGAAGATCCATGAAGCCTTTAAAGGGACTGTTGAGAGGATTACAGGACCTCGAACCGTATCCGCATTCAAGGAGAAAGGTGTGCTTAGCATCAGCGAATTCGTCGTCGCTGGTGATAATCTTGTCTCCAAATGCCCTACCTGGTCTTGGGAATCGGGTGAACCAAGCAAGCGGAAGTCATATTTGCCCGTGGAAAAGCAGTACTTGATTACAAGAAACGTGCCTTGTCTAAGGAGGGCTGCATCTGTAGAAGAAGAATATGAAGCTGCAGGAGGGGAAATTCTCCTTGATAACGAAGATAATGATGGGTGGTTGGCAACCCATGGGAAGCCAAAAGAAACTAAATGTGATGATGAGGAGAACTTTCCTTCCATGGAGACTTTAGAAATCAGCAAGAACAAGACTATTCAGTCGATCCCCTCATATTTTGGGGGTGAGGAGGAAGAAGATATTCCTGACATGGCAGAGTATGAGGAACCTGACAACCTTATTGAAACAGATGCTGCAACACTTCAATCTTCATATCTTGTGGTTCATGAACCTGATGACGACAATATTCTACGGACCCGAACCTATGATGTCAGCATCACGTATGATAAATATTATCAGACTCCTCGTGTGTGGCTTACTGGGTATGATGAGGTTGGTCACCGTAATTATGCTTTGTGGCTTATATCTTCAAGGATGCTTCTACAACCAGAGCTTGTACTTGAAGATGTTAGTCAAGACCATGCACACAAAACGGTGACTATTGAGGACCATCCCCATTTGCCTGGGAAACATGCATCTGTACATCCATGCCGACATGGGGCTGTGATGAAAAAGATCATTGATGTTTTAATGTCACGTGGAGTTGAGCCAGAAGTTGATAAGTACCTCTTCTTATTCTTGAAATTTGTGGCCTCTGTAATTCCAACTATTGAATACGACTACACTATGGACTTTGATCTTGGCAGCTCCAGCAATTGA 999 43.94 MWSAREMVLSQKIHEAFKGTVERITGPRTVSAFKEKGVLSISEFVVAGDNLVSKCPTWSWESGEPSKRKSYLPVEKQYLITRNVPCLRRAASVEEEYEAAGGEILLDNEDNDGWLATHGKPKETKCDDEENFPSMETLEISKNKTIQSIPSYFGGEEEEDIPDMAEYEEPDNLIETDAATLQSSYLVVHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDEVGHRNYALWLISSRMLLQPELVLEDVSQDHAHKTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVASVIPTIEYDYTMDFDLGSSSN 332
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi1g00912 332 Gene3D - 161 316 - -
Tesi1g00912 332 Pfam Autophagocytosis associated protein, active-site domain 43 321 IPR007135 GO:0019787(InterPro)
Tesi1g00912 332 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 9 326 IPR046962 GO:0000045(PANTHER)|GO:0000407(PANTHER)|GO:0000422(PANTHER)|GO:0005829(PANTHER)|GO:0019776(PANTHER)|GO:0044804(PANTHER)|GO:0141046(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi1g00912 K08343 ubiquitin-like-conjugating enzyme ATG3