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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi1g00913 ATGGAAAATCGAACAATGGAGAAGGAGATGCAGCAAGCCAATTCGTTTCTTGATTTTTATTACATGAAAGCTGCACAAATTGAAAATCAGTGGAATATGTACTCAGATCAGGTGGAGAAACTTGCGGTAGATAGGTGGCAAAGCTCAGCTGCTTTGGAAAATACCCAAAAGTGGCTGTTGGATGTGAGAGGAGAATCTCAGCAGGTAAGGGAGTCACTGGAGGAGTCACAGGGCAAGGTTGAGAGAAGTCGATTTGGTCTTGCAGAGCTGCATATAGAACTAGAGAAGGAGAGGTTCAACAAGAAAAGAATAGAGGAGGAGTTGGAAACAGTGAGGAGGAAGGCTACACGCCTTAGAGCACGAACTGAGGGGTCATCACTCTTAGAAAAGCTTCAGCAAGAACTCAGAGATTACAAGGAAATACTCAAGTGCAGTATCTGCCATGACAAACCAAAAGAGGTAAAGTTTCAATTTCAATATTTAGTTTTCTATGGGCTGTTGTGTGGTGCTTGA 513 42.88 MENRTMEKEMQQANSFLDFYYMKAAQIENQWNMYSDQVEKLAVDRWQSSAALENTQKWLLDVRGESQQVRESLEESQGKVERSRFGLAELHIELEKERFNKKRIEEELETVRRKATRLRARTEGSSLLEKLQQELRDYKEILKCSICHDKPKEVKFQFQYLVFYGLLCGA 170
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi1g00913 170 PANTHER RING FINGER PROTEIN-RELATED 2 154 IPR013956 GO:0004842(InterPro)|GO:0005634(PANTHER)|GO:0033503(PANTHER)|GO:0061630(PANTHER)|GO:0071894(PANTHER)
Tesi1g00913 170 Coils Coil 87 121 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi1g00913 K10696 E3 ubiquitin-protein ligase BRE1 [EC:2.3.2.27]