AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi1g00920 ATGGCGGAAGGGAATGTGCAATCACGTTATGTGAAGCTTACGAAGGATCAAACGCCCTTGGAGGAGATTAGGCCTGGAGAGCTCAATCAACCCGTTGAGGTTCCTCAGTTGGCCACTCACAGATGCAATGAGTGTGGACAGCCCTTACCTGAAAGTTATGAGCCCCCAGCAGATGAAGCCTGGACGACTGGGATTTTTGGATGTGCTGAAGATACAGAGAGTTGCTGGACTGGATTGTTTTGTCCATGCGTATTGTTTGGGCGTAATGTTGAAAGTTTGAGAGAAGATATCCCTTGGACCAAAGCATGCATTTGTCATGCTATTTGCATTGAAGGTGGCATTGCGCTTGCAGCAGCAACGGCAGTCTTCCATGGTATTGATCCGAGGACATCATCTCTCATTTGTGAGGGTCTGTTATTTGCTTGGTGGATGTGTGGCATCTATACTGGCGTCTTTCGCGAATCGTTACAGAAGAATTATCATCTCGAGAACTCGCCCTGTGACCCATGTATGGTGCACTGCCTCATGCACTGGTGTGCTTTATGTCAGGAGCACCGGGAGATGAAGGAGCGTCTCTCTGATAATGTCATCGAGCCTATGACCATCGTCAATCCTCCGCCGATACAAGAGATGAATGCAAGTGAGAACCGTGAGTCTACAACATCCTCTGCAAACGGCATGGAGCACACAAATTTGGAGATGCAGGCTTTATAG 714 48.32 MAEGNVQSRYVKLTKDQTPLEEIRPGELNQPVEVPQLATHRCNECGQPLPESYEPPADEAWTTGIFGCAEDTESCWTGLFCPCVLFGRNVESLREDIPWTKACICHAICIEGGIALAAATAVFHGIDPRTSSLICEGLLFAWWMCGIYTGVFRESLQKNYHLENSPCDPCMVHCLMHWCALCQEHREMKERLSDNVIEPMTIVNPPPIQEMNASENRESTTSSANGMEHTNLEMQAL 237
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi1g00920 237 PANTHER DUF614 FAMILY PROTEIN-RELATED 58 191 IPR006461 -
Tesi1g00920 237 MobiDBLite consensus disorder prediction 205 237 - -
Tesi1g00920 237 MobiDBLite consensus disorder prediction 207 237 - -
Tesi1g00920 237 Pfam PLAC8 family 61 187 IPR006461 -
Tesi1g00920 237 NCBIfam PCR-CNR family Cys-rich domain 60 190 IPR006461 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi1g00920 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr1:7593364 Tesi1g00920 Tesi-Chr1:20951918 wgd
Tesi Tesi-Chr1:20951918 Tesi21g00652 Tesi-Chr21:13700601 wgd