Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi1g00931 | ATGCCATATTCACCTGAGAGAAACCCTAAGCCATTGAAGAGACCTGTAAGCTGGCCAGACCTCTGGTTCAACGACAAAGCTCTCCAGCATGTGGTTTTCAAGATGCAGCTACAATCTCTCGCGACAGAAGCAGAGGAGAAAGCTACAGTTGAAACAGACGAAACCCTAACCCTAGATTCTTCAAGGACCAACTTAACCTCCCTGTTATCCGACGAGCTTCTTCTTCGAATCCTCTCCAACCTACCTGAATCACAGCGAAATTCGAATTCGCTTGTGTGCAAGCGATGGCTGACTCTGCAAGGCCGTCTGGTTCGCTCCGTCAAGCTCCTAGATTGGGATTTTCTCCAATCCGATAGGCTTTTTTCTCGTTTCCCTAATATTACTGATGTTGATGTCGTGCGCGCGTGTATTGGTTCGCCGATGAATTCTGGGATCTTGTTGACGCATAAATTCGTCTCGATTCACCTTGATTCTGTTTTCGCGCCTGCTGGGTTTATCCGCGAGGAGAATTTACTGTCGTCGGATTCGATTGATAGAGGGCTTCGAGTTCTTGCCCGTGGATGCCCTAATTTACGGAAACTTGTTCTGATTGCTGCTACTGAGACAGGGTTGTCGAATGTTGCTGAGGAATGCCCAACGTTGCAGGAATTGGAGCTGCATCGTTGTACAGATATCTCATTGCGTGGGATTTCTGCCTGCCATAATCTTCAGATCTTGAAATTGATTGGAATTGTGGATGGTTTTTACAATTCTGTGATTTCGGATATCGGTTTGACAATCTTGGCACAAGGGTGTAAGCGGTTGGTGAAGCTTGAGCTGACTGGATGTGAGGGGAGCTATGATGGGATAAAAGCTATTGGTCAGTGCTGCCAAATGCTGGAGGAATTCACTTTATGCGATCACAGGATGGAAGGGGGGTGGATTTCTGCCCTATCATTCTGTGGAAATTTGAAGACTCTGAGGCTTCAATCATGCAAGAGCATTGATCCAAGCCCTGGGCAGGATGAGCATTTGGGTTCTTGCCCTACTCTTGAAGAATTACACTTGCAGCGGTGCCAAATGCGGGATAAGCGGAGTGTAAAAGCATTGTTTCTAGTATGTGAGGCTGTCAAGGAAATTGTCTTTCAGGACTGTTGGGGATTGGACAATGATATGTTCAGCATTGCAAGTACTTGCAGGTATCGGGTTCCCTTATTATGTTGCTTCTCATTTGTTGCCCGATACTGCTTCCAAGCTCTTACATTTCTCAGGAAGAGGATGATTTGGATGTACTTTCGTTATACAACTGATGAGAAAAGTGCAGTAGGTAGGAGGGTAAAGTCTTTATCTTTGGAAGGATGCTCATTGCTAACATCAGAAGGCCTGCAGTCAGTCATTCTCTCCTGGAAGGAGCTTAAAAGCCTAAGAGTCGTCTCATGTAACAATATAAAGGATAGTGAAGTCGCTCCTGAACTATCAGCCTTGTTTTCTGTTCTTAAAGAGTTGCAATGGCGGCCAGATTCCAGAGCTCTTCTTTCATCAAATCTTGCTGGGACTGGCCTCGGAAAAAGGGGCAGTAGATTTTTCAAGAGGGCATGA | 1578 | 45.82 | MPYSPERNPKPLKRPVSWPDLWFNDKALQHVVFKMQLQSLATEAEEKATVETDETLTLDSSRTNLTSLLSDELLLRILSNLPESQRNSNSLVCKRWLTLQGRLVRSVKLLDWDFLQSDRLFSRFPNITDVDVVRACIGSPMNSGILLTHKFVSIHLDSVFAPAGFIREENLLSSDSIDRGLRVLARGCPNLRKLVLIAATETGLSNVAEECPTLQELELHRCTDISLRGISACHNLQILKLIGIVDGFYNSVISDIGLTILAQGCKRLVKLELTGCEGSYDGIKAIGQCCQMLEEFTLCDHRMEGGWISALSFCGNLKTLRLQSCKSIDPSPGQDEHLGSCPTLEELHLQRCQMRDKRSVKALFLVCEAVKEIVFQDCWGLDNDMFSIASTCRYRVPLLCCFSFVARYCFQALTFLRKRMIWMYFRYTTDEKSAVGRRVKSLSLEGCSLLTSEGLQSVILSWKELKSLRVVSCNNIKDSEVAPELSALFSVLKELQWRPDSRALLSSNLAGTGLGKRGSRFFKRA | 525 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi1g00931 | 525 | SMART | LRR-CC-2 | 436 | 461 | IPR006553 | - | |
| Tesi1g00931 | 525 | SMART | LRR-CC-2 | 341 | 366 | IPR006553 | - | |
| Tesi1g00931 | 525 | SMART | LRR-CC-2 | 265 | 289 | IPR006553 | - | |
| Tesi1g00931 | 525 | SMART | LRR-CC-2 | 211 | 233 | IPR006553 | - | |
| Tesi1g00931 | 525 | Gene3D | Ribonuclease Inhibitor | 431 | 507 | IPR032675 | - | |
| Tesi1g00931 | 525 | Gene3D | Ribonuclease Inhibitor | 280 | 398 | IPR032675 | - | |
| Tesi1g00931 | 525 | Gene3D | Ribonuclease Inhibitor | 62 | 279 | IPR032675 | - | |
| Tesi1g00931 | 525 | Pfam | Leucine Rich repeat | 341 | 357 | IPR001611 | GO:0005515(InterPro) | |
| Tesi1g00931 | 525 | PANTHER | UNCHARACTERIZED | 67 | 496 | - | GO:0019005(PANTHER)|GO:0031146(PANTHER) | |
| Tesi1g00931 | 525 | FunFam | F-box protein At5g51380 | 62 | 329 | - | - | |
| Tesi1g00931 | 525 | SUPERFAMILY | F-box domain | 63 | 112 | IPR036047 | GO:0005515(InterPro) | |
| Tesi1g00931 | 525 | SUPERFAMILY | RNI-like | 105 | 378 | - | - | |
| Tesi1g00931 | 525 | Pfam | F-box domain | 67 | 99 | IPR001810 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi1g00931 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr1:21293926 | Tesi22g00297 | Tesi-Chr22:21331246 | wgd |