AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi1g00939 ATGTTTGGATGCTGGAATGAGCTATTCGAAGATAGAGTGGTAGCCTGCAACAACGGGAAAAGCGCTGCACTTGAGCGTGGCTTCCTTGCATCCAAACACTTAGACAAGCTAGTCATCTTCTTAGCAAAAAGAGATGGCATTGATAAGCTTGTCAAGACCTTGCAATATGTCTCCAAGATTGTCCACTGGCACCTTGAGACCACAAACCCCGATACCGCCCGAAGAGCCAAGCAATGGGAGGTGGCCTCCGGCCTCAGCCGTAAAGCTTTCCGAAGTGGCCGGTTTCTCACTGGCTTCAATTCCATCCGGCGAAACCCAGGTTCGACCCCAACTTTCCGCTTCCTTTCCGTTCTCGCCAACGCCGGAGAGATGGTGTATTTCTTCTTTGATCACTTCCTGTGGGTGTCAAGGATAGGAGTACTGGATTCCAAGTTAGCCATGAAAATGAGCTTCATTTCGGCATTTGGTGAGGCCTTTGGGTATATTTTTTTCATTATTTCGGATTTCATAATCATTAAAGAGGGACTAGAGGCACAGAGAAAGCTCTCCCTGGAACCAGAAATGGAGAAAATCGCGGAGACGAAAGAAAACATTAGGAAGATCTTCGCTGATAGAGTTATGAGGTTAATGGCAATGGCGGCCAATATAGCCGACTTGGTTATCGCAGTGGCGGACATCGAACCGAACCCAGTCTGTAACCATGCAGTAACACTTGGTATTAGTGGATTAGTCTCTGCATGGGCTGGTTGTTTCCGACATAAATCTAACTGTGGGGCATATGTCTTCCTCCATGTTCATTCTGAAAAAAAGACGAAGAATCATGTAGAATCCCACAAGAAATATAGGGATATGTTATGCAAAACAGCGCGAGTTGAAGTTTCCTCTCTGCATAAGGTTCGGCAAAGCATGTTAAGAGAGGCTGATATGAAGTTTTCATTGCTGGGATTTGACCTTGGGACCACTGCATTTGGGTACGAGAGGACCATGGGGGTGCACTTGGTGGTTCTAGCCAAGCTAAATTTTCTAGCCATGGCCGGCCATGGTCACAGTTCTTTGGTCACTGCCCTGGTTTGGCCCTTCACTCTGAAACTTCCGTTGAGTAGTAGAAATATGCATAAAGTATATACCGATGCCGCCGTCGCTTCGCGGCTGTTCTTGTTCCGATTAAATCGGATAGTGTTCGGAGATGAACTGAATAATGCTAACAGCAGGAGATGGGAAAGAGCTCTCCGCTTAGTCTACGAGAGGTTTCGTTCTTCGACGATTCAACCCGATGAAGATAGTCTCCATGTTGTTTCCATGCTTTCTCTTTAG 1314 46.65 MFGCWNELFEDRVVACNNGKSAALERGFLASKHLDKLVIFLAKRDGIDKLVKTLQYVSKIVHWHLETTNPDTARRAKQWEVASGLSRKAFRSGRFLTGFNSIRRNPGSTPTFRFLSVLANAGEMVYFFFDHFLWVSRIGVLDSKLAMKMSFISAFGEAFGYIFFIISDFIIIKEGLEAQRKLSLEPEMEKIAETKENIRKIFADRVMRLMAMAANIADLVIAVADIEPNPVCNHAVTLGISGLVSAWAGCFRHKSNCGAYVFLHVHSEKKTKNHVESHKKYRDMLCKTARVEVSSLHKVRQSMLREADMKFSLLGFDLGTTAFGYERTMGVHLVVLAKLNFLAMAGHGHSSLVTALVWPFTLKLPLSSRNMHKVYTDAAVASRLFLFRLNRIVFGDELNNANSRRWERALRLVYERFRSSTIQPDEDSLHVVSMLSL 437
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi1g00939 437 PANTHER PEROXISOMAL BIOGENESIS FACTOR 11 31 252 - GO:0005778(PANTHER)|GO:0016559(PANTHER)
Tesi1g00939 437 Pfam Peroxisomal biogenesis factor 11 (PEX11) 34 250 IPR008733 GO:0005778(InterPro)|GO:0016559(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi1g00939 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr1:21492494 Tesi2g00089 Tesi-Chr2:1933976 dispersed
Tesi Tesi-Chr1:21492494 Tesi1g00942 Tesi-Chr1:21582650 proximal