AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi1g00945 ATGATGGTCGATCTGGGAGCGTTCTCTGACGAGAAATTCGACGCGAAGAAATGGATCAACACTATCTGTCAATCTCGGCACCCACAAGATCCACTGGAGAAGCACCTTGCAGATCTGGAAATGAAGTTGCAGATGATGTCCGAAGAGATTGCAGCGTCTCTGGAGGAACAGAGCAGCTCCGCTATCCTCCGAATCCCCCGCGCCAGTCGCGACGTCATTCGCCTCCGGGACGACGCAATCTCTCTCCGTAATTCTGTTTCTGGGATCCTCCTCAAGCTCAAAAAGGCGGAAGGATCCTCAGCTGAATCTATAGCTGCCCTTGCTAAAGTTGATACAGTCAAGCAGAGAATGGAAGCCGCATATGAGACATTGCAGGATGCTGCAGGGTTGACTCAATTAAGTGCAAGTGTTGAGGATGTGTTTGCCAGTGGCGATCTTCCTAGGGTTGCAGAAACCTTGGCCAACATGAGGCACTGCTTGTCTGCTGTTGGTGAGGTTGCAGAGTTTGCTAATGTTAGAAAGCAGCTTGAGGTTTTAGAGGATAGGCTAGAAGCAATGGTTCAGCCTCTTCTATCAGATGCTTTATCTAATCGCAAGGTCAATAAGTTATTAGTTGATGCTTTATCTAATTATAAGGTTGATGGTGTTCAAGATTTGCGGGGAATCCTCATTCGAATTGGGAGATTCAAGTCTTTAGAGATGCACTACACAAGAGTTCACTTAAAGCCTATAAAGAAACTCTGGGAAGATTTTGATTTGAGACAGCGAGCTAATAAGCTTGGAAGTGAGAGGCATGATGTGGAAAGGCTATCAAGTCTTAATGAGTCTTCATCTAGTTTGCCTACACTTCCATTTGCTAGTTGGTTGCCAGGTTTCTATGATGAAGTGCTACTCTATCTTGAACAAGAATGGAAGTGGTGTATACTTGCTTTTCCCGATGATTATAAAATTCTTGTCCCAAAGCTACTTATTGAGACAATGGCAGCAATGGTTGCAAGCTTTATCTCTCGTATCAACCTTGCGACTGGAGAAGTTGTTCCTGAAACAAGGTCATTGGCTAAAGGCATACTGGATATCTTATCTGGGGATATGCCAAAAGGTACTAAGATACAGATCAAGCATCTTGAGGCGCTGATTGAATTACACAATTTGACGAGTGCTTTTGCAAGGAATATTCAACACTTGTTTTCGGAATCTGATCTTCAGGTTTTAGTGGATACACTAAAATTTGTCTACTCTCCTTATGATCCATATAAACAGAGGTATGGACAGTTGGAGCGTGCCATCCTCTCCTCTGAGATTGCTGGAGTAGATCTGCGGGGAGCTGTTGCTCGTGGTGTGGGAGCCCAGGGAATTGAACTCAGTGAAACAGTTCGAAGGATGGAGGAATCCATTCCCCAAGTAATTGTGATTCTTGAAGCAGCTGTAGAGAGATGCATCAGCTTTACTGGAGGTTCCGAGGCAGATGAGCTTATTCTTGCACTTGATGACATCATGTTGCAGTATATCTCTATCCTGCAAGAAACCTTAAAATCATTAAGAACTGTATGTGGAGTGGATACTTCTGGTGATGGGGTTGGTCCAAAGAAGGAGATGGGATTGGAAAGAAAAGAAGGAACTCACAATACGCGCAAAGTTGATATGATCTCGGATGAGGAGGAGTGGTCTATTGTCCAAGGTGCATTGCAGATCCTTACGGTTGCAGATTGTCTAACCAGCAGATCTTCGGTCTTCGAAGCTTCCTTAAGAGCTACTCTTGCCAGGCTGAGCACAACTTTGTCCCTTTCAGCATTTGGTTCTAGTTTGGACCAAAACCAATCACATGTGGCTAGTGATGATGGAACCGGGAAAGTATCTCTGGCAGGAAGGGCTGCCTTGGATGTCGCAACTCTGCGGCTTATTGATGTTCCTGAGAAAGCTAGGAGACTCTTTAACCTTTTAGATCAGTCCAAAGATCCCCGGTTTCATGCGCTTCCACTTGCATCTCAAAGAGTAGCAGCTTTTGCAGACACAGTGAATGAACTTGTCTATGATGTTCTCATATCCAAAGTACGACAACGCCTGAGCGATGTATCGCGTTTGCCAATCTGGTCTTCAGTAGAGGAGCCAAGTGCATTTCCTCTCCCAAGTTTCAGTGCATACCCCCAGTCCTATGTGACCAGCGTTGGTGAATATCTTCTTACTTTACCTCAACAGTTGGAGCCACTTGCTGAGGGCATCTCTAACAGCAATGGCAACACTGATGAAGCCCAGTTCTTCGCGACCGAATGGATGTTCAAGGTTGCGGAGGGTGCCACAGCTCTTTACATGGAGCAGTTGCGAGGAATTCAGTTTATAACCGACCGTGGAGCACAACAGCTATCGGCTGATATTGAGTACCTGAGTAACGTGCTCTCTGCTTTGTCAATGCCGATTCCTCCAATACTTGCTACATTTCACACTTGCCTCTCTACCCATCGGGACCGGCTCCGGGATCTCGTGAAATCGGAATCAGGAAACCAGCTTGATCTTCCAACAGCTCACCTTGTGTGCAAGATTCGGCGAGTGAATCTAGACCAGTGA 2562 45.78 MMVDLGAFSDEKFDAKKWINTICQSRHPQDPLEKHLADLEMKLQMMSEEIAASLEEQSSSAILRIPRASRDVIRLRDDAISLRNSVSGILLKLKKAEGSSAESIAALAKVDTVKQRMEAAYETLQDAAGLTQLSASVEDVFASGDLPRVAETLANMRHCLSAVGEVAEFANVRKQLEVLEDRLEAMVQPLLSDALSNRKVNKLLVDALSNYKVDGVQDLRGILIRIGRFKSLEMHYTRVHLKPIKKLWEDFDLRQRANKLGSERHDVERLSSLNESSSSLPTLPFASWLPGFYDEVLLYLEQEWKWCILAFPDDYKILVPKLLIETMAAMVASFISRINLATGEVVPETRSLAKGILDILSGDMPKGTKIQIKHLEALIELHNLTSAFARNIQHLFSESDLQVLVDTLKFVYSPYDPYKQRYGQLERAILSSEIAGVDLRGAVARGVGAQGIELSETVRRMEESIPQVIVILEAAVERCISFTGGSEADELILALDDIMLQYISILQETLKSLRTVCGVDTSGDGVGPKKEMGLERKEGTHNTRKVDMISDEEEWSIVQGALQILTVADCLTSRSSVFEASLRATLARLSTTLSLSAFGSSLDQNQSHVASDDGTGKVSLAGRAALDVATLRLIDVPEKARRLFNLLDQSKDPRFHALPLASQRVAAFADTVNELVYDVLISKVRQRLSDVSRLPIWSSVEEPSAFPLPSFSAYPQSYVTSVGEYLLTLPQQLEPLAEGISNSNGNTDEAQFFATEWMFKVAEGATALYMEQLRGIQFITDRGAQQLSADIEYLSNVLSALSMPIPPILATFHTCLSTHRDRLRDLVKSESGNQLDLPTAHLVCKIRRVNLDQ 853
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi1g00945 853 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 2 851 IPR019335 GO:0006886(InterPro)|GO:0006890(PANTHER)|GO:0007030(PANTHER)|GO:0017119(PANTHER)|GO:0017119(InterPro)
Tesi1g00945 853 Coils Coil 36 56 - -
Tesi1g00945 853 Pfam Golgi complex component 7 (COG7) 4 848 IPR019335 GO:0006886(InterPro)|GO:0017119(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi1g00945 K20294 conserved oligomeric Golgi complex subunit 7