AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi1g00957 ATGGGGTGTATCCAGACCTACTCTTTAGCTTCTGGAGTATTTATCTTTAATTTCGAGAATGTAGAGTTCAAACAGAGGGTCCTAGATCAGGGGCCGTGGTACTGGGAGAAAAAACCTCTGGTTCTTAGGCCATGGGATCCAGATGTGAGTTTGGAGAAATCGATAATCAAGAAAATTCCTATTTGGGTGAAGTTCCCTTGCCTGAAACTTCACCTTTGGAACGATTCAGTCCTTGGCCGGATTGCTAGTACCATCGGTTTGGATTCTACGGCCAGGTTAGAGGCCGTTATTGGCGCTCAGGTTGAGCCGTCCTTGGACCCTAAGGAGATGAATTCATCGGAGGAGCCTTGGTCAATGTTTGGTAGAAATAGGAGATCAGAGGCCATGGTCGACAACCCTTCTTTGGGGAGTGGATCTCGGGAGGTCCATGAACTCCATCGCTTATATAGGATACAGAAGACCTTGATGGAGGAGTTCAACTGGAAAGAGTTCGATAGATACACTTCATGGACAGAAAACACAGAGTCAACTCCGATACCATTTCAAAATTATCCAATATATAAACCATTGGCAGAAGAGAACACATTTTCCATATTGTCTATGATGGGCTCAATGCAAACTGCAAACCAGCACTCATTAGAGCAGGTCCAAGAGACCTACTCTAAGTTTCAGCAACGGCATCTCAACCTGCGGCTTCCAGCAGATGCATACATTAGCCGTGTTGGGCCAGAGCATCCCCATAAAATGAATTTAAAGTCATATCTCGAAGATTCCATGGAAGTGAAGAATTTTCTTCATAGTAACCATGTTTCTGATCAAGAGGAGCTGAAGCTTTGCCTGAATATTGAAGAGAGTACGAGTAAGAAGGGGGATTCCAGTAGACCTTGGTACAATAGAGAGACTTATTTGGTTACCCAAGATGTCGTTCATTTAGAAGAATCCATTGAAAGTGTGTCAAAGGATACTGCCAGACCTGTTACTTCCCTCACCCTTGAAGCTCCAATCAATGTTGTAGAAACGAATGAGGCTCAAATTCCGGTCCTGTCTGATTCAAGCTTTTCCAGAATAAGGATGGATCTTGGTCACAGGCTTTTTACCAGTCACTCTCTTGCCGACCACACTGGAAGCTTTCAAGAGCAAAAACCCTTTAGTCTAGATACCGGACTCGGTGAATGCGATACCAGTAGATCATTTGTTGATCTGTGCACGAGGAAGCAACAATCCTCTTCATACAATACAGCTCATGCTGACCGTAACAGAGTTCAGCTTGATGAATCATCCTTTTACTCTGAAGATCCTTTGGTGACCTTTCCTTCACCAACTGCTAGTCCACCAGTTGTTATCCATGGACTTGCTGATAAGTTCCACAAAGGGACTCAGAGTATCACGACCTTTCGGAGCAAAACCAACAACAGCTGTTCGGATGAATTTTCTGATGTGCGTCAACAAGATAATGCTGCATATTCTGCTTTGACAGATACTAGAGGAAAAGACAGTAGCACACCATCTTGGGTTACCAGGACCAGGTTCAAAGAAAATAGTGGGAGTGAAGTGGGTGCTATAGATCTGGAATCTGTTCCCGAGGACCCAGTAGAACTCTGTGAAGACTTCGGCAACCGGGGTGTTAGCAGAGCTAATGTGGATTTGTTACTGGGAACGCCGAATAGTTTTTTACATGATAATCAAACTGGTACTTCAGTTGGGAGTCCCACCTATACATCATTGGGGGGTACAATCTTGCCCCAAATAGCAGGAGATGCAGAAATCGGACAAGTAAACTGCGAAAAAAGTGAAGAAGAAACGGTATCTTCGAGTCCATTTCATAGTAATATTGCACCTCAAACTGAACATTGCAAAGAATATCCTGCAGCATGCAACTCAGACTGCATCACTGACAACAATTCGAGCGGTATAAAGGACTTGAAATCTCAAGCAGAAGATAAACATGACTCTGCATTTGACAGGTCTGTAACTACTCAATTAGGATCTCAAGTCCCAGAAACTCATGCGAGTGAGCAGTACCTGATTGTGGAAAGTAGTTTTTATGCTCGCACACAGGAGAAATCAAAATTTCAAAATAAAAGTGACCAGCAAAAAAAGGCTATAGAAGTGGAAACTTGTATCCAAAGAGCAGCCGAATCTCTTATCAAAATTTCCTTGGAAACTTCACGGTGTTCTCAAGATTGGTTTCCCAAGGCAGGATCAAATGAGTTGGAAAATGGGGAGAGCAAGCAGCCCCAGTATTCTTCGGATTCTTTTGAGTCTATTACGTTGAGACTAACAGAAAGCAGTGTGGATGACTACTCTGTTTCATCGAGGCAAGTTGAGGTGAATGAAACAGATAAAAAGGGGTGTCCATATAAGTTGAGAAGGGGGAGAAGGCTCAAAGATTTCCAGAGAGAGATACTGCCGGGTTTGGCATCCCTTTCCAGACATGATATTTGTGAGGATATAAATAGTATAGGGGAAATTGTTAATTTGAAAGAGCTTAGGAAGAACAGATCCAGGAAGGTTGGTGGAGGGAACTGGTGTTCACCTGTCAGAAGCAGAAGGTCGAGATTCAGTTATGTTGATGGAAGAAATTATTCATGA 2592 43.29 MGCIQTYSLASGVFIFNFENVEFKQRVLDQGPWYWEKKPLVLRPWDPDVSLEKSIIKKIPIWVKFPCLKLHLWNDSVLGRIASTIGLDSTARLEAVIGAQVEPSLDPKEMNSSEEPWSMFGRNRRSEAMVDNPSLGSGSREVHELHRLYRIQKTLMEEFNWKEFDRYTSWTENTESTPIPFQNYPIYKPLAEENTFSILSMMGSMQTANQHSLEQVQETYSKFQQRHLNLRLPADAYISRVGPEHPHKMNLKSYLEDSMEVKNFLHSNHVSDQEELKLCLNIEESTSKKGDSSRPWYNRETYLVTQDVVHLEESIESVSKDTARPVTSLTLEAPINVVETNEAQIPVLSDSSFSRIRMDLGHRLFTSHSLADHTGSFQEQKPFSLDTGLGECDTSRSFVDLCTRKQQSSSYNTAHADRNRVQLDESSFYSEDPLVTFPSPTASPPVVIHGLADKFHKGTQSITTFRSKTNNSCSDEFSDVRQQDNAAYSALTDTRGKDSSTPSWVTRTRFKENSGSEVGAIDLESVPEDPVELCEDFGNRGVSRANVDLLLGTPNSFLHDNQTGTSVGSPTYTSLGGTILPQIAGDAEIGQVNCEKSEEETVSSSPFHSNIAPQTEHCKEYPAACNSDCITDNNSSGIKDLKSQAEDKHDSAFDRSVTTQLGSQVPETHASEQYLIVESSFYARTQEKSKFQNKSDQQKKAIEVETCIQRAAESLIKISLETSRCSQDWFPKAGSNELENGESKQPQYSSDSFESITLRLTESSVDDYSVSSRQVEVNETDKKGCPYKLRRGRRLKDFQREILPGLASLSRHDICEDINSIGEIVNLKELRKNRSRKVGGGNWCSPVRSRRSRFSYVDGRNYS 863
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi1g00957 863 Pfam Domain of unknown function (DUF4283) 4 86 IPR025558 -
Tesi1g00957 863 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 142 842 - -
Tesi1g00957 863 Pfam Plant protein of unknown function (DUF863) 741 825 IPR008581 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi1g00957 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr18:15073476 Tesi1g00957 Tesi-Chr1:21897351 dispersed
Tesi Tesi-Chr1:21897351 Tesi8g00906 Tesi-Chr8:19399044 dispersed
Tesi Tesi-Chr1:21853523 Tesi1g00957 Tesi-Chr1:21897351 proximal
Tesi Tesi-Chr1:21897351 Tesi22g00330 Tesi-Chr22:22266151 wgd