Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi1g00960 | ATGGTGGGGTTTTCTTCTGTTCCTCAGTGGCTTGAATCCCTCTTAGGAGAGAAGTTCTTCAATCCATGTTTCATTCATGAGTCTGCGAAGAAGAACGAAAAGAACGTCTTTTGCTTGGATTGTTGCACCAGCATATGTCCTCACTGTTTGTATCCCCATCACTCTCACCGACTCTTGAAGATTCGGAGGTATGTTTATCACGACGTTATACGGTTGGACGATGTTGAGAAATTAATCGACTGTGCGTTTGTTCAAGCGTACACGACGAACAGTGCAAAGGTAATATTTATAAATCAGAGGCCTCAGTCTCGACCATTCAGAGGCTCCGGTAACATCTGCAGCACCTGCGACAGGAGCTTACAAGACCCATATCTCTTCTGTTCTCTTGCCTGCAAGGTTCATCATCTGGTTAGAAGTGAAGGTGGACTGTCGAAATATCTGTACGAATGCGAATTTCTTCGATTACAAGGAGGAAAAGGAGAGAGTTTTTGCGAATTCGACGACGAGCAAATGACCCCAGACTCGGTTCTTGAATCACCGAATTCGTTAAGAACTTCGTCTGGTTCGAGTGCAAGTGTTGGTGGCATGGGTTGCAAGAACTTGGCCTGCACTGCTACAACTGAGTTCGTGAGGAAGAAACGTAGTAGCGTTTCGGTTTCTCGTCCGACATTCCGGCCGATATGTTCACCGGATTCTGAAATGGGGGTCAATATGAACCGGCGAAAGGGTATTCCACACAGGTCTCCTCTTTATTGA | 756 | 46.03 | MVGFSSVPQWLESLLGEKFFNPCFIHESAKKNEKNVFCLDCCTSICPHCLYPHHSHRLLKIRRYVYHDVIRLDDVEKLIDCAFVQAYTTNSAKVIFINQRPQSRPFRGSGNICSTCDRSLQDPYLFCSLACKVHHLVRSEGGLSKYLYECEFLRLQGGKGESFCEFDDEQMTPDSVLESPNSLRTSSGSSASVGGMGCKNLACTATTEFVRKKRSSVSVSRPTFRPICSPDSEMGVNMNRRKGIPHRSPLY | 251 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi1g00960 | 251 | Pfam | PLATZ transcription factor | 62 | 133 | IPR006734 | - | |
| Tesi1g00960 | 251 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 5 | 250 | - | - | |
| Tesi1g00960 | 251 | MobiDBLite | consensus disorder prediction | 230 | 251 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi1g00960 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr1:21969413 | Tesi24g01039 | Tesi-Chr24:32051782 | dispersed | |
| Tesi | Tesi-Chr15:27508774 | Tesi1g00960 | Tesi-Chr1:21969413 | transposed | |
| Tesi | Tesi-Chr1:21969413 | Tesi21g00611 | Tesi-Chr21:12438971 | wgd | |
| Tesi | Tesi-Chr1:21969413 | Tesi22g00332 | Tesi-Chr22:22303766 | wgd |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Tesi | PLATZ | 1.5e-26 | No_clan | TF | PLATZ |