Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi1g00962 | ATGGAAGGATCAGCAAAGCCTCCCCAAATCTCCGAAATGTTTCAGAAATTCGCTTTGGCTTTCAAGACCAAGACCATCGAGTTCTTCGCCGAGGAAGAAGAAGATGCCGTCGCCGGCGATGATTCAGACGGATTTTCCCTTCTGGATTCCGCCGAAGAAGTCATCACCGGCCAGAGAGTCGTGGTCCTAAAACCAGACCAAGATCAAAAACCAACAAAACCCTTTACTCAAGAAATCAGCCTCACCAATCTCCAAATCCTCCAAACCCTAATTTCATCTCTCTTCGCTACCATTTCTTCCTTCGAAGCTTCTTATCTTCATCTTCAAACGGCCCAATCTCCGTTTGACGCAGACAGCATCAAGGCCGCCGATCGAGCTGCGGTCTCCCATCTCCAGAGGCTATGTGAGATGAAGCAATGCTATAGAAGTCTCCGTAAGAACCCTAATCTTAACCCTAATTTCCCTATTTCGTCGCATTTGGAAGCTCAAGTAGAGGAGAATCAGAGCAAGCTTCGTTCTTTGGAGATGGTTTTCAATCGGTTGCAGTCTGATATCGATCTCAAAGACTCTGAGGTTTCGGCGCTGAAGCAAAAGTTGGAGAAGATTCAGAAATCGAATTTGAGGTTATCCAAGAGCTTATCTGATTCAAATTGCTGTTCTTCGCTGTCTTCTACTTCTACTTCTACTTCTCCTCCTGGGGTTTTGTTATCTGTTGGACTATTCAATTCTGTGTTAGAGGATGCTTGTCGATCGACGCGTAGCTTTACCAAGTTCTTGATTGATTTGATGAAGAAAGCTGGGTGGGATTTGGATTTGGCGGCGAATTCTGTTCATCCGGATATTGAGTATGTGAAGAGGGGGCATTATCGGTATGCGTTGCTGTCATATGTTTGTTTAGGGATGTTTCGAGGTTTTGATTCAGAGGGTTTTGATTTGGGAGGGCATGAAAGTGAGTCCAATGGAATTGACCTAAGTTTTCAGAGGAAGAATTCTCTGAAGCTATTCGTCGAGCATGGCACAGGTGATGCAATGGAGATTCTAAGTCGGAACCCACATGGTGATTTTACAAGGTTCTGCGAGAAGAAGTACCAGCAGCTCATCCACCCTACAATGGAGTCCTCTCTTTTTAAAAATTTGGATCAGAATGAACTTGTATTGAATTCTTGGAGGTCATCTACTGCTTTATATGAGCTGTTTGTAAATATGGCTAGCTCGATATGGATGCTTCATAAATTGGCTTTCTCGTTCAATCCCACTGTCGAGATCTTTCAGGTAGAGCAAGGGGTTGATTTCTCGATGGTATACATGGAAAATGTCACTCGGAGAGATGTCTCACCAGGCAAAACAAGGGCCAAAGTGGGGTTTACGGTAACTCCGGGCTTTAGAATTGGGAGGACAGTCATCCAGTCTCAGGTGTATCTAACTGGCATTAGATGTGCAGAGTAA | 1446 | 44.54 | MEGSAKPPQISEMFQKFALAFKTKTIEFFAEEEEDAVAGDDSDGFSLLDSAEEVITGQRVVVLKPDQDQKPTKPFTQEISLTNLQILQTLISSLFATISSFEASYLHLQTAQSPFDADSIKAADRAAVSHLQRLCEMKQCYRSLRKNPNLNPNFPISSHLEAQVEENQSKLRSLEMVFNRLQSDIDLKDSEVSALKQKLEKIQKSNLRLSKSLSDSNCCSSLSSTSTSTSPPGVLLSVGLFNSVLEDACRSTRSFTKFLIDLMKKAGWDLDLAANSVHPDIEYVKRGHYRYALLSYVCLGMFRGFDSEGFDLGGHESESNGIDLSFQRKNSLKLFVEHGTGDAMEILSRNPHGDFTRFCEKKYQQLIHPTMESSLFKNLDQNELVLNSWRSSTALYELFVNMASSIWMLHKLAFSFNPTVEIFQVEQGVDFSMVYMENVTRRDVSPGKTRAKVGFTVTPGFRIGRTVIQSQVYLTGIRCAE | 481 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi1g00962 | 481 | Coils | Coil | 185 | 205 | - | - | |
| Tesi1g00962 | 481 | PANTHER | PROTEIN GRAVITROPIC IN THE LIGHT 1 | 11 | 474 | IPR040225 | GO:0009639(InterPro)|GO:0009959(InterPro) | |
| Tesi1g00962 | 481 | Pfam | Plant protein of unknown function (DUF641) | 85 | 211 | IPR006943 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi1g00962 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr1:22034740 | Tesi22g00356 | Tesi-Chr22:22835756 | dispersed | |
| Tesi | Tesi-Chr1:22034740 | Tesi1g00971 | Tesi-Chr1:22248337 | proximal | |
| Tesi | Tesi-Chr1:22034740 | Tesi22g00338 | Tesi-Chr22:22440142 | wgd |