AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi21g00599 ATGCACTCGGATTTGAGAATCGCAATCTGGGATCGACTGTTCTCGCCACACCTAACGCCAATCACCGCCTCCCTAGCCCTGACATCGATGGAAGCCCCTGTTGACTTCACCGGCTACGAGGTACTATACTTTCCAGGCGCCATCAATGCCCCTGATCCATGTGGAGGCTTAAGGGACTCATCTTCAACCTTCGAAAAAGCATTCTCCTCTCGCCGACGACGATCAAGCACTAAGACCTCCGGCCACCCTCTGCAAGAATCACAGTCCTCAACATCCCAACACGAGATTTCCAACGGGAAGGACGAGGAGATGAAATCCAACGAAATCATCCGAGAGAAGCAGAAATCTGTTGCTGGTATAGTTCCTGCTATTGAGAAAGCACGCCTTTATCGTGGTAAGGGTGGAGAGATCATGCGTTCCGCTCTTTCCCGGTTCATCAACTGTATCTCTTTAGCTCGTGTGTTCTTGCCAGAGAAGATAAAACGAAGTTTTCTTGATACCCTTAATGAGAATATGAGACATCCCAATGCTCAGATACAGAGTTCTGCTGTTGAAGCCCTAAATCACTTTGTTCCAGCATACCTTGTCACCACAGGCAATGGAGGTACCTATGATATGACATCGAAGTACTTGGAACTCTTGACTGATCCTAATGTGGCAGCAAGACGAGGATCGGCTTTGGCAATAGGCGTGTTGCCTTTTGAGGTTTTGGCTAAAAGATGGAAAATTGTGTTATTGAAGCTTTGTAACTCTTGCATAATAGAGGATAAACCTGACGATAGGGATGCTGAAGCACGTGTAAATGCCGTCCGAGGACTTGCATCAGTATGTGAAACATTAAGCGATACAAGAAAACATTCTGTTTTCTTATCTGAGGAAGATGACATGTCTATGTATCTTCTGATAAAGAATGAAGTGATGCATACTTTATTTAAGGCTCTTGATGACTATTCTGTAGATAACAGAGGTGACGTGGGCTCTTGGGTTCGCGAGGCTGCTATGGATGGCCTTGAAAAATGTACATATATCCTCTGCGAGAGAGAATCTGTTGGTTTTCCTACAAAGAGATCTGGAGTTTCATGTGTGCTGGAGCTGCCTGATAGTGATATGGTCAAACATGATCAGAAACACTCACTTTTTGACGTAAGTCTTGCTACCAGCTTAATTGGAGGCATTGCTAAGCAAGCTGTTGAGAAGATTGATAAAATTAGAGATGTGGCTGCAAAGATTCTCCAAAGGATTTTGTACAACGACAAGATTTTTATTCCATGCATACCTTATAGAGAAAAGCTGGAAAAAATTGTTCCCAATCAAGCGGATTTAAAGTGGGGAGTACCTGCTTTCTCATATCCACGTTTTGTACAGTTACTCCAATTAAGTTGTTACAGTAGATCTGTGCTTTCTGGGTTAGTTATCTCTATTGGGGGTTTACAAGATTCCTTGCGGAAGGCATCACTCACGGCTTTGTTAAGGTATCTACAAGTCACTGAAACTGAAGAAGAAGAAAGTAGCTCCAGAGAGTTTATGTTAGGTACTGACCTCCTTTGGGTTCTTCAACGCTATAAGAGATGTGATAGAGTTATTATACCCACTTTGAAGACCGTCGAGATTCTCTTCACCAAAAAGGTCTTTTTGAACATGGAGGCCCATATTCCAGTCTTCTGTGGTGGTGTTTTGGATTCCCTGGCGGTTGAGTTGAAGGGATCAAAGAACTTCTCCAAGCTATATGCTGGCATTTCCATTCTTGGATATATTGCTTCAGTTTCGGACCCCATCAACTCTCTGGCCTTCTCTCAGCTTCTTACTTTTCTTTGCCATCGATATCCTAAGTTTCTTTGTGTTTATATTCAGATACGGAAGGCTTCTGCTGATCAAGTTTATCTTGTCCTCCTGCAAAATGGCAATCTTGTGGCAGAGGACAAAATTGACAAGGCAATTGAAATCCTTTCTGAAACTCGCTGGGAAGGTGACATAGAGGAAGCAAAGCACCAAAAATTAAAATTTTATGAAGTGGCAGGTTTAGAAACGGGGTCACTTCTCAAGATTAGCAGCAAAGATTCAAACATGGACAGCGAGAAGAGGGCCACAGATGATGAAAATGCATCATACTCATCATTAGTTGGGTTAACGGGATTCTGA 2139 43.15 MHSDLRIAIWDRLFSPHLTPITASLALTSMEAPVDFTGYEVLYFPGAINAPDPCGGLRDSSSTFEKAFSSRRRRSSTKTSGHPLQESQSSTSQHEISNGKDEEMKSNEIIREKQKSVAGIVPAIEKARLYRGKGGEIMRSALSRFINCISLARVFLPEKIKRSFLDTLNENMRHPNAQIQSSAVEALNHFVPAYLVTTGNGGTYDMTSKYLELLTDPNVAARRGSALAIGVLPFEVLAKRWKIVLLKLCNSCIIEDKPDDRDAEARVNAVRGLASVCETLSDTRKHSVFLSEEDDMSMYLLIKNEVMHTLFKALDDYSVDNRGDVGSWVREAAMDGLEKCTYILCERESVGFPTKRSGVSCVLELPDSDMVKHDQKHSLFDVSLATSLIGGIAKQAVEKIDKIRDVAAKILQRILYNDKIFIPCIPYREKLEKIVPNQADLKWGVPAFSYPRFVQLLQLSCYSRSVLSGLVISIGGLQDSLRKASLTALLRYLQVTETEEEESSSREFMLGTDLLWVLQRYKRCDRVIIPTLKTVEILFTKKVFLNMEAHIPVFCGGVLDSLAVELKGSKNFSKLYAGISILGYIASVSDPINSLAFSQLLTFLCHRYPKFLCVYIQIRKASADQVYLVLLQNGNLVAEDKIDKAIEILSETRWEGDIEEAKHQKLKFYEVAGLETGSLLKISSKDSNMDSEKRATDDENASYSSLVGLTGF 712
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi21g00599 712 MobiDBLite consensus disorder prediction 59 111 - -
Tesi21g00599 712 PANTHER BETA-TUBULIN COFACTOR D 103 679 IPR033162 GO:0000226(PANTHER)|GO:0005096(InterPro)|GO:0005096(PANTHER)|GO:0006457(PANTHER)|GO:0007021(InterPro)|GO:0007023(InterPro)|GO:0048487(InterPro)|GO:0048487(PANTHER)
Tesi21g00599 712 MobiDBLite consensus disorder prediction 96 111 - -
Tesi21g00599 712 MobiDBLite consensus disorder prediction 80 95 - -
Tesi21g00599 712 SUPERFAMILY ARM repeat 158 632 IPR016024 -
Tesi21g00599 712 Pfam Tubulin folding cofactor D C terminal 387 574 IPR022577 -
Tesi21g00599 712 Gene3D - 114 435 IPR011989 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi21g00599 K21767 tubulin-specific chaperone D