AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi21g00607 ATGTTGGCATCGGGATATTCGTCTTCTTCAGCTCTTTTCACATCATCTCTTCAGCTAGAACAGGAAGGGAGTTGCAGGCTTTCAGTTCGATCGGCACCTCCGAAATTCCTATTCAAGTTTCAGAGATCGTTCCGTCAAATCCGCGCTTCAAACAGCAATGCCTCCTCCCTAGATGCTGGTTTAAGTACTGAATTAGACGCTGTGTCGAGCTTCAGCGAGATCGTGCCAGATACTGTCATTTTCGATGACTTCGAAAGGTTTCCGCCAACTGCTGCTACTGTTAGCTCTTCGCTGCTTCTAGGTATTTGTAGCCTTCCGGATACTATATTTAGGAACGCTATAGAAACTGCTCTGGCAGATTCAGAGTGTTATCCGCAAGAGAACTCCAAAGCTCGACTGTCCTGTTTCTCTAACAAGGCTTTAGTCAATGTTGGGGGTGATTTGGCAAAACTAGTTCCTGGCAGAGTGTCGACTGAAGTGGATGCTCGTCTGGCTTATGACACACATGGCATTGTTAGGAAGGTGCATGAACTGCTGAAGTTGTACAATGACATAGAGATCGCTCCAGAGCGTCTGCTGTTCAAAATTCCTTCTACTTGGCAAGGAATTGAGGCCTCGAGATTGCTGGAATCTGAAGGCATACAGACACACTTGACTTTTGTTTACAGCTTTTCTCAAGCTGCAGCTGCAGCACAAGCTGGCGCTTCTGTTATCCAGATATTTGTTGGCCGCATTAGGGATTGGGGACGCAATCATTCTGGAGACCCTGAGATAGAAGCTGCTTGCCAAAGAGGAGAAGATCCTGGGTTGGCTTTGGTAACCAAGGCATATAATTACATTCACAAGTATGGACACAAGTCAAAGTTGATGGCTGCAGCAGTTCGGAACAAGCAGGATTTATTTAGCCTTCTGGGGGTCGATTATATTATTGCACCATTGAAGGTATTGCAGTCTCTCAAAGAATCCATTATCTCTCCTGATGAGAAATACTCTTTCGTGAGGAGGCTATCCCCAGACTCTGCAGCCACCTACAATTTCAGTGAAGAAGAGCTAGTAAAGTGGGACCAATTAAGCTTTGCATCAGCTATGGGGCCCGCAAGCGAAGACCTTCTAGCTGGTGGACTGGAAGGTTACATTAATCAAGCGAGGCGGGTTGAGGAGTTATTCGAGAAGATATGGCCGCCTCCAAACGTGTGA 1197 46.45 MLASGYSSSSALFTSSLQLEQEGSCRLSVRSAPPKFLFKFQRSFRQIRASNSNASSLDAGLSTELDAVSSFSEIVPDTVIFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAIETALADSECYPQENSKARLSCFSNKALVNVGGDLAKLVPGRVSTEVDARLAYDTHGIVRKVHELLKLYNDIEIAPERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFSQAAAAAQAGASVIQIFVGRIRDWGRNHSGDPEIEAACQRGEDPGLALVTKAYNYIHKYGHKSKLMAAAVRNKQDLFSLLGVDYIIAPLKVLQSLKESIISPDEKYSFVRRLSPDSAATYNFSEEELVKWDQLSFASAMGPASEDLLAGGLEGYINQARRVEELFEKIWPPPNV 398
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi21g00607 398 Pfam Transaldolase-Fructose-6-phosphate aldolase 108 323 IPR001585 GO:0005975(InterPro)
Tesi21g00607 398 SUPERFAMILY Aldolase 62 393 - -
Tesi21g00607 398 CDD Transaldolase-TalAB 63 389 IPR004730 GO:0004801(InterPro)|GO:0005737(InterPro)|GO:0006098(InterPro)
Tesi21g00607 398 FunFam Transaldolase B 62 392 - -
Tesi21g00607 398 PANTHER TRANSALDOLASE 63 393 IPR001585 GO:0004801(PANTHER)|GO:0005622(PANTHER)|GO:0005975(InterPro)|GO:0009052(PANTHER)
Tesi21g00607 398 Gene3D Aldolase class I 62 392 IPR013785 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi21g00607 K00616 transaldolase [EC:2.2.1.2]