AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi21g00608 | ATGGATATAAAGTCGAACCATGCTGCTCCTGTTCTCACTGATCCTGTACCAATAAACAAGCCAAGATTAGGCATCTATTCTAGTCTGTTGGCTTACTCGCCTTCTGGAGCTGCATTTTCTTCCAGCCTGTATCTTACAATTCCCAGGAAGAAGCCTGGAAAACTCGATGACGTCCGTTCCAGCAGTTGGCTGGATACCATGAAATCCTCTTCACCTCCTCGCAAGAAGCTAACTAAGGACTTCAGCATCGATGTTGCGACAAATGATGCTGATGTTACTTACCGTAACTGGATGCTTAAATATCCGTCCGCACTTACCTCTTTCGAGCAAATCACAAATTATGCAAAGGAGAAGAAGATAGTATTGTTTCTGGACTACGATGGGACTCTTTCACCAATTGTAGATGACCCTGATTGCGCCTTTATGTCTAATTCTATGCGTTCTGCTGTGAAAAATGTTGCCAAGTATTTCCCAACTGCAATAATTAGTGGAAGAAGGCGTGATAAGGTTAACGAGTTTATAGGACTAACGGAACTCTATTATGCCGGTAGTCATGGGATGGACATCATGGGCCCGGTCAAAAACTCGGTGGCCGATGACCATCCAAACTGTATTAGGTCCGCTGACAAGCAGGGTAAGGCGGTAAATCTGTTCCAGCCTGCTAGTGAATTTTTACCTATGATCGATGAGGTTTTTAGATCCCTTGTCGAGAATACTAGAGGAATTAAAGGTGCAAAAGTTGAGAATAATAAGTTTTGTGCTTCTGTACATTACCGTAAGGTAGATGAGAAGGTAATTGTTGCTAGTTGGACTACAGTTGCAGAAATCGTTCACGACATTCTAAAAGACTACCCACGTCTGCGATTAACTCATGGGCGGAAGGTTTTAGAGATCCGCCCTGTGATTAACTGGGACAAAGGGAAAGCAGTAGAATTTATACTTGAATCACTTGGACTAAGTAATTGTGACGATGTACTCCCCATTTATGTTGGAGATGACCGGACAGATGAAGATGCATTTAAGATGTTGCGGGAAGGAAACCAAGGTTACGGAATTTTAGTATCTTCAATGCCAAAAGAGAGCAACGCATTCTACTCTTTGAGGGACCCGTCGGAGGTCATGGAATTTCTCAAGTCCCTGGTTAGATGGAAGAAATTGAGTGCTCTATAA | 1170 | 42.99 | MDIKSNHAAPVLTDPVPINKPRLGIYSSLLAYSPSGAAFSSSLYLTIPRKKPGKLDDVRSSSWLDTMKSSSPPRKKLTKDFSIDVATNDADVTYRNWMLKYPSALTSFEQITNYAKEKKIVLFLDYDGTLSPIVDDPDCAFMSNSMRSAVKNVAKYFPTAIISGRRRDKVNEFIGLTELYYAGSHGMDIMGPVKNSVADDHPNCIRSADKQGKAVNLFQPASEFLPMIDEVFRSLVENTRGIKGAKVENNKFCASVHYRKVDEKVIVASWTTVAEIVHDILKDYPRLRLTHGRKVLEIRPVINWDKGKAVEFILESLGLSNCDDVLPIYVGDDRTDEDAFKMLREGNQGYGILVSSMPKESNAFYSLRDPSEVMEFLKSLVRWKKLSAL | 389 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi21g00608 | 389 | CDD | HAD-TPP | 121 | 375 | - | - | |
| Tesi21g00608 | 389 | NCBIfam | HAD-IIB family hydrolase | 122 | 345 | IPR006379 | - | |
| Tesi21g00608 | 389 | Pfam | Trehalose-phosphatase | 123 | 371 | IPR003337 | GO:0005992(InterPro) | |
| Tesi21g00608 | 389 | SUPERFAMILY | HAD-like | 121 | 384 | IPR036412 | - | |
| Tesi21g00608 | 389 | FunFam | Trehalose 6-phosphate phosphatase | 221 | 301 | - | - | |
| Tesi21g00608 | 389 | Gene3D | - | 120 | 271 | IPR023214 | - | |
| Tesi21g00608 | 389 | Gene3D | - | 272 | 388 | IPR023214 | - | |
| Tesi21g00608 | 389 | PANTHER | TREHALOSE 6-PHOSPHATE PHOSPHATASE | 46 | 387 | IPR044651 | GO:0004805(PANTHER)|GO:0004805(InterPro)|GO:0005992(PANTHER)|GO:0005992(InterPro) | |
| Tesi21g00608 | 389 | NCBIfam | trehalose-phosphatase | 118 | 382 | IPR003337 | GO:0005992(InterPro) | |
| Tesi21g00608 | 389 | FunFam | Trehalose 6-phosphate phosphatase | 227 | 389 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi21g00608 | K01087 | trehalose 6-phosphate phosphatase [EC:3.1.3.12] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr21:12371944 | Tesi5g00368 | Tesi-Chr5:32256876 | dispersed | |
| Tesi | Tesi-Chr1:6943779 | Tesi21g00608 | Tesi-Chr21:12371944 | wgd | |
| Tesi | Tesi-Chr21:12371944 | Tesi22g00335 | Tesi-Chr22:22376274 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Tesi1g00357 | . | 558 | 834 | Trehalose Biosynthesis gene family | AT1G70290 | 25.743 | 9.06e-12 | 65.1 | |
| Tesi1g00743 | . | 1 | 855 | Trehalose Biosynthesis gene family | AT4G17770 | 79.463 | 0.0 | 1439.0 | |
| Tesi1g01595 | . | 555 | 940 | Trehalose Biosynthesis gene family | AT1G78580 | 65.729 | 3.13e-174 | 509.0 | |
| Tesi1g01596 | . | 1 | 412 | Trehalose Biosynthesis gene family | AT1G78580 | 79.08 | 0.0 | 669.0 | |
| Tesi1g01658 | . | 1 | 842 | Trehalose Biosynthesis gene family | AT1G06410 | 77.423 | 0.0 | 1390.0 | |
| Tesi2g01250 | . | 1 | 840 | Trehalose Biosynthesis gene family | AT1G06410 | 77.37 | 0.0 | 1370.0 | |
| Tesi2g01656 | . | 582 | 826 | Trehalose Biosynthesis gene family | AT1G06410 | 25.097 | 9.72e-08 | 52.4 | |
| Tesi3g00555 | . | 1 | 840 | Trehalose Biosynthesis gene family | AT1G06410 | 77.251 | 0.0 | 1374.0 | |
| Tesi3g00611 | . | 592 | 940 | Trehalose Biosynthesis gene family | AT1G78580 | 68.067 | 7.04e-164 | 480.0 | |
| Tesi4g00525 | . | 1 | 835 | Trehalose Biosynthesis gene family | AT2G18700 | 68.198 | 0.0 | 1210.0 | |
| Tesi4g00791 | . | 1 | 855 | Trehalose Biosynthesis gene family | AT4G17770 | 73.666 | 0.0 | 1340.0 | |
| Tesi5g00107 | . | 20 | 154 | Trehalose Biosynthesis gene family | AT1G60140 | 47.059 | 1.17e-28 | 110.0 | |
| Tesi5g00368 | . | 577 | 827 | Trehalose Biosynthesis gene family | AT1G60140 | 25.368 | 4.61e-07 | 50.1 | |
| Tesi6g00565 | . | 582 | 841 | Trehalose Biosynthesis gene family | AT1G06410 | 26.182 | 3.65e-09 | 56.2 | |
| Tesi6g00567 | . | 582 | 841 | Trehalose Biosynthesis gene family | AT1G06410 | 27.273 | 4.08e-09 | 56.6 | |
| Tesi10g00158 | . | 645 | 818 | Trehalose Biosynthesis gene family | AT2G18700 | 55.429 | 4.04e-51 | 178.0 | |
| Tesi10g00287 | . | 25 | 850 | Trehalose Biosynthesis gene family | AT4G17770 | 72.662 | 0.0 | 1273.0 | |
| Tesi10g00651 | . | 1 | 861 | Trehalose Biosynthesis gene family | AT1G60140 | 67.207 | 0.0 | 1219.0 | |
| Tesi10g00652 | . | 10 | 859 | Trehalose Biosynthesis gene family | AT1G60140 | 66.98 | 0.0 | 1194.0 | |
| Tesi15g00194 | . | 1 | 867 | Trehalose Biosynthesis gene family | AT1G23870 | 64.954 | 0.0 | 1228.0 | |
| Tesi17g00395 | . | 1 | 840 | Trehalose Biosynthesis gene family | AT1G06410 | 76.54 | 0.0 | 1365.0 | |
| Tesi18g00417 | . | 1 | 850 | Trehalose Biosynthesis gene family | AT4G17770 | 74.209 | 0.0 | 1335.0 | |
| Tesi18g00851 | . | 1 | 844 | Trehalose Biosynthesis gene family | AT1G23870 | 76.777 | 0.0 | 1377.0 | |
| Tesi21g00124 | . | 69 | 626 | Trehalose Biosynthesis gene family | AT4G24040 | 60.893 | 0.0 | 687.0 | |
| Tesi21g00608 | . | 581 | 834 | Trehalose Biosynthesis gene family | AT1G70290 | 26.071 | 2.55e-12 | 66.6 | |
| Tesi22g00118 | . | 1 | 855 | Trehalose Biosynthesis gene family | AT4G17770 | 78.063 | 0.0 | 1418.0 | |
| Tesi22g00335 | . | 573 | 834 | Trehalose Biosynthesis gene family | AT1G70290 | 26.578 | 4.00e-10 | 59.7 | |
| Tesi23g00327 | . | 31 | 865 | Trehalose Biosynthesis gene family | AT1G23870 | 72.814 | 0.0 | 1272.0 |