Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi21g00618 | ATGGCTTCTGCAATCGCTTTAAGAGGAGCCACCGCTTCAAACCTCTTCAATAAAAAACTCCTCAACCCAGTTCGCTACTTGGCCACCGTACCATCCTCCTCCCGTCCCTTCAACACCAGCGCTCAGAAGCGTGATTCCGACAACGCCGATCGCAGCGTCGCCATTGATCGCCGGCCGGAAATGTCCGTATCTCGACGCCGGGAGTCTCCTGTTATTCCCTTTACAGATGTGTTTGATCCGTTTTCTCAAGCATGGAGCTTGAGCCAGGTGATGAACCTAATGGATCAGTTCATGGAGGATCCGTTCCTCGCTGCTTCGAGAGGAATGGGAGCTGGATCGAGGGGAGCAGGGTGGGATGTGAAGGAAGACGAGGAAGCTCTGTATGTGAGGATGGACATGCCTGGGCTCGGGAAAGAGGACGTGAAGGTGTTGGTGGAGCAGAACACACTAGTGATCAAAGGAGAAGGCCAGAAGGAATCGGAGGAGGAAGAGAGTGGAAGAAGGTATACTAGCAGGCTCGATCTCCCTCAGAATCTATACAAGCTAGATCAAATCAAAGCTGAGATGAAGAATGGAGTTCTTAAGGTTGTGGTGCCCAAGGTGAAGGAGGAGGAGAGAAAGGATGTTGTTCAGGTCCCAATCGAGTAA | 648 | 51.7 | MASAIALRGATASNLFNKKLLNPVRYLATVPSSSRPFNTSAQKRDSDNADRSVAIDRRPEMSVSRRRESPVIPFTDVFDPFSQAWSLSQVMNLMDQFMEDPFLAASRGMGAGSRGAGWDVKEDEEALYVRMDMPGLGKEDVKVLVEQNTLVIKGEGQKESEEEESGRRYTSRLDLPQNLYKLDQIKAEMKNGVLKVVVPKVKEEERKDVVQVPIE | 215 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi21g00618 | 215 | PANTHER | 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL | 9 | 206 | IPR044656 | - | |
| Tesi21g00618 | 215 | Pfam | Hsp20-alpha crystallin family | 119 | 214 | IPR002068 | - | |
| Tesi21g00618 | 215 | MobiDBLite | consensus disorder prediction | 32 | 64 | - | - | |
| Tesi21g00618 | 215 | CDD | ACD-sHsps-like | 119 | 192 | - | - | |
| Tesi21g00618 | 215 | Gene3D | - | 70 | 214 | IPR008978 | - | |
| Tesi21g00618 | 215 | MobiDBLite | consensus disorder prediction | 44 | 64 | - | - | |
| Tesi21g00618 | 215 | SUPERFAMILY | HSP20-like chaperones | 93 | 207 | IPR008978 | - | |
| Tesi21g00618 | 215 | ProSiteProfiles | Small heat shock protein (sHSP) domain profile. | 109 | 215 | IPR002068 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi21g00618 | K13993 | HSP20 family protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr21:12673362 | Tesi22g00312 | Tesi-Chr22:21739991 | dispersed | |
| Tesi | Tesi-Chr21:12673362 | Tesi13g00415 | Tesi-Chr13:8725148 | transposed |