Gene detail

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Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tesi21g00639	ATGGGTGTATTACCGGAGGCCCTCCGCCCCAAACCTGGCCGCTTGTCCCTTTCTCAACAGCGAGTTTATGAGGATTTTGTTCAGTTTCCCTGGCAAAATAAATCAAGCCAGAGCTCAAATGCTAATGCTGCTGGTCCACCTGCTTCATCTGGTGGTCCTGTTAGTTCTGGCTTGTCCTGTGCTTATGGCTCAAGATCTCGACAGCTCAACTCAGGCATCTACTCTTATGGGCAAGGTGACCCAGAATTCATTTCTGAGGAGATGGACCCTACTTCAGCACAGCTTATTAGTGCTTCAGCTCATATTGAGGCTGATAGTGTTACCCAGCATGGTTCTGAAACCAATCCAGTTGTTGCTTCATTTCCTTCCACTTCTACAGCCCTTGAATTGCATTCAGTGGAACCCTCTTGTGCTGTATCTGGAGATACGGTACAACCATTACCTGCAACTTCTGCCACAGAGCTCCTGGGAAGTGGCATTGCAGAACCTTTATTGACCACAGGAGAAGCATTAGATAAGTATCAGATCATTGCAAAGAAGGTAGCAAATATCCTTGCTTATGGCTTTTCAATTTCTCAGTTGAGGCTCTCTATGTTTCAGTTGGAAACTTTGGTAACCAAAGATGCTGGAGACACAGAAATTCAGGAAGTTATTGCTGAGGTTCCTGAAATCATTCTCAGATGTATAAGCAGAGATGAGGCTGCCTTGGCTTTGTCCCAAAAGGTTTTTAAGAGCTTATATGAGAACACATCAAACAGTTTACACGTTGATGCTCATCTTACAATCCTGGCTGCCATTCGAGATGTTTGCAAGCTTCTTGTTAAGGAGCTCACGAGTTGGGTGATTTACTCTGATGAGGAGCGGAAGTTCAACAAGGACATAACTGTTGGCCTCATACGCAATGAATTACTAAACCTTGCTGAATACAACGTCCACATGGCAAAGCTTATTGACGCGGGAAGGAATAAAGCTGCTATGGAATTTGCAATTTCTCTTCTCCAAACCCTGGTGGTAAAGGAATTCCGAGTCAGTGTGTCAGAACTCCACAATCTCGTTGATGCATTAGGAAAGCTTGCGATGAGTCCTGGATCTCCAGAATTTTTACATCAGTTGGTTGAGATTGCCAGGAATCCTGCTGCTAATGCAGCTGCTCTGTATGGTTTTACTGTTGGAAAGGAGGATAAGGCTAGGCAATCTCGGGACAATAAGGCTCCTCGTCACTCCAATACAAGCAGGGAGTACTATAACAATGATGAGTCAGTAGGAGCATATCCTGTTGGTTTTCGTGAGCAGCAGGTTACTCGGATGTTTGTTGAATGGTCCCAGATATGTGAACTTCCTGGTACAAATGATGCAACATGTACCCATTATATTTCACGACTCCAGCAAAATGGATTACTTAATGGGGATGATACGTCAGATCGCTTTTTCCGCCACCTCACGGAATATTCCATAGCACACTGCCTATCTACTGAGGCAATTAGTCCAGGCTCATTGTCAGTGCAGTCACCTCAACAAGTGAAACACCTATCATTTCTTGCAATCGATATATACACAAAACTTGTCTTTTTAATCCTAAAGTACTCTGCGGTGGACCAGGGATCGACTAAACTCTTTCTTTTGCCAAAGATTCTGTCGGTGACTGTAAGAGTCATTCAAAAAGATGCAGAGGATAAGAAATCATCTTTTAATCCAAGGCCATATTTCAGGTTGTTCATTAACTGGATTTCGGACCTTGGTTCTCTAAACCCTGGCCTTGATGGTGACAACTTTCAGGTGTTGACAACATTTGCGAATGCTTTCCACTTGTTGCAGCCTCTTAAAGTTCCTGGGTTCAGCTTTACATGGCTTGACCTGGTGAGTCACCGTAGTTTTATGCCTAAATTGCTCACTGGCGGTCCTCAGAAGGGTTGGCCTTTAGTTCAACGATTGCTTGCGGACTTACTCAAATTCATGGAGCCATACTTGAGGAATGCTGAACTGGGCGAGCCGGTTCAATTGCTGTATAAAGGCACTCTGAGGGTGCTGCTAGTGCTACTTCACGATTTCCCAGAGTTCCTCTGTGATTATCATTTCAGTTTCTGTGATTTGATCCCACCCAGCTGCATCCAGATGCGGAATATTATCCTCAGTGCATTTCCTCGCAATATGAGGCTGCCTGATCCTTCTACTCCCAACTTAAAGATTGATTTGCTACCAGAGATCAGCCAATCACCACGTATTTTCTCTGAGGTCGATGCTGCTCTGAAAGTGAAGCAGATTAAGGGTGACATTGATGAGTATCTCAAGACAAGGCATCTGGGGTCTTCATTCTTGACAGAGCTGAAGCAGAGACTGCTTCTTCCACAATATGAGGCAGCACAGGCTGGGACCAGGTACAATGTACCCTTGATCAACTCCCTTGTGCTCTATGTGGGAATGCAGGAAATCCAGCAACTACAGAAGAAAACTTCCCCTCCCCATGCACAACCATTGTCTGCTGCTTCAATGGAGGATTTCTTGGCGGGTGCTCCCATGAATATTATTGAGACTCTGATAGTGGACCTAGATTCGGAAGGACGCTATCTCTTCCTCAATGCAGCCGCTAACCAGCTACGCTACCCAAACAACCATACACATTACTTCTCCCGTCTCCTTCTGTGCTTGTTTGTTAAAGCAAACCAGGAGAACGTCCAGGAGCAAATAACGAGAGTGTTGTTAGAGCGCCTGATCGTTAATCGACCTCATCCTTGGGGCCTTCTGGTCACTTTCATTGAGCTCCTCAAGAATCCTTTATACAACTTCTGGAATCGGTCGTTCACAAGTTGTGCACCTGAGATGGAGAAACTGTTTGAAGCGGTCTCAAGATCATGCGGAGGAACAAAACCCGTGGATGAGAGTATGGTGTCTGGTGGAATCCCCGACAACACACACTGA	2916	45.23	MGVLPEALRPKPGRLSLSQQRVYEDFVQFPWQNKSSQSSNANAAGPPASSGGPVSSGLSCAYGSRSRQLNSGIYSYGQGDPEFISEEMDPTSAQLISASAHIEADSVTQHGSETNPVVASFPSTSTALELHSVEPSCAVSGDTVQPLPATSATELLGSGIAEPLLTTGEALDKYQIIAKKVANILAYGFSISQLRLSMFQLETLVTKDAGDTEIQEVIAEVPEIILRCISRDEAALALSQKVFKSLYENTSNSLHVDAHLTILAAIRDVCKLLVKELTSWVIYSDEERKFNKDITVGLIRNELLNLAEYNVHMAKLIDAGRNKAAMEFAISLLQTLVVKEFRVSVSELHNLVDALGKLAMSPGSPEFLHQLVEIARNPAANAAALYGFTVGKEDKARQSRDNKAPRHSNTSREYYNNDESVGAYPVGFREQQVTRMFVEWSQICELPGTNDATCTHYISRLQQNGLLNGDDTSDRFFRHLTEYSIAHCLSTEAISPGSLSVQSPQQVKHLSFLAIDIYTKLVFLILKYSAVDQGSTKLFLLPKILSVTVRVIQKDAEDKKSSFNPRPYFRLFINWISDLGSLNPGLDGDNFQVLTTFANAFHLLQPLKVPGFSFTWLDLVSHRSFMPKLLTGGPQKGWPLVQRLLADLLKFMEPYLRNAELGEPVQLLYKGTLRVLLVLLHDFPEFLCDYHFSFCDLIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEISQSPRIFSEVDAALKVKQIKGDIDEYLKTRHLGSSFLTELKQRLLLPQYEAAQAGTRYNVPLINSLVLYVGMQEIQQLQKKTSPPHAQPLSAASMEDFLAGAPMNIIETLIVDLDSEGRYLFLNAAANQLRYPNNHTHYFSRLLLCLFVKANQENVQEQITRVLLERLIVNRPHPWGLLVTFIELLKNPLYNFWNRSFTSCAPEMEKLFEAVSRSCGGTKPVDESMVSGGIPDNTH	971

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tesi21g00639	971	Pfam	CCR4-Not complex component, Not1	587	947	IPR007196	-
	Tesi21g00639	971	Gene3D	-	716	946	-	-
	Tesi21g00639	971	MobiDBLite	consensus disorder prediction	34	56	-	-
	Tesi21g00639	971	FunFam	CCR4-NOT transcription complex subunit 1	716	946	-	-
	Tesi21g00639	971	PANTHER	CCR4-NOT TRANSCRIPTION COMPLEX	2	953	IPR040398	GO:0000288(PANTHER)\|GO:0000932(PANTHER)\|GO:0017148(InterPro)\|GO:0030015(InterPro)\|GO:0030015(PANTHER)\|GO:0060090(PANTHER)
	Tesi21g00639	971	Gene3D	-	424	715	-	-
	Tesi21g00639	971	CDD	NOT1-connector	211	373	-	-
	Tesi21g00639	971	FunFam	Transcription regulator	417	719	-	-
	Tesi21g00639	971	MobiDBLite	consensus disorder prediction	396	416	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tesi21g00639	K12604	CCR4-NOT transcription complex subunit 1

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Tesi	Tesi-Chr1:21224763	Tesi21g00639	Tesi-Chr21:13116495	wgd
	Tesi	Tesi-Chr21:13116495	Tesi22g00295	Tesi-Chr22:21273616	wgd