AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi21g00650 ATGACCCTCTTGCGAAGGGTCTCCTTTAACTTCCCACAAGTTTTGGGATTTACAAGGAGGTCCTTCAATTCATGGAAATCCCCTGGAGAGTCCCTCGAATCCTCGTCCGCCTCCACTCTCACCCATGGAATTCACGTCTTCCAGTGCCCTCTATCAGATTGCATTGCTTCGAAAGGCGGAAACATATTGAGCGTCGACGTGTTTGTTCCTGAAAACAAGCAGGTTTTCTATTCCAGAAGTGAGTTTGTCTTCGACTCTGTTCGATGGCCTCGGGCGGAGATGGATGAGGACTTCCGCAAACTGTCAAAGTTGTTCAATGCAATGAAATCCATCGTACGGGTGCCCAATCTTGACCCCAAATACAAGATTTCAGTTCTTGCTTCAAAGCAGGACCATTGTCTGGTTGATTTGTTACATGGATGGCAGGATGGAAGACTTCCAGTGGATATAACTTGTGTAATAAGTAATCACAATAGAGATCCAAACACTCACGTGATTCGGTTTCTTGAGAGGCATGGAATTCCATATCATCATTTGCGCACGGCTGCAGGGAATAAAAGAGAAGCAGAGATCTTGGATTTGGTCCAGAACACTGATTTTTTAGTGCTCGCTAGATATATGCAGATATTGTCTGGAAATTTTTTGGAGAGCTATGGGAAGGATGTAATTAACATCCACCATGGCCTTTTGCCATCATTCAAGGGTGGGAATCCTTCTAGACAGGCTTTTGATGCTGGTGTGAAGTTGATTGGTGCAACAAGTCACTTTGTAACCGAAGAACTTGATGCAGGGCCAATTATCGAACAGATGCCCCAAGCTGGTTTCAAAACTTATCTCCTTGTGGAAAGCTTGGAGGAAAATGTGCCAGAATTTTCGATGCCCATGATGGAGACGCGCAAACACGAGCACTTTTACTTCATTTCCTACAAAGTAGAAGCCAGAGTTGAGAGAGTTTCACATCGAGATAACTTGCGGAGTTTTGTGCAGAAATCAGAGAACCTTGAGAAACAATGCCTGGCAAAGGCAGTAAGATCATATTGTGAGCTCCGAGTGCTACCTTACGAGGAAATCAAAACTGTTGTATTTTGA 1089 44.26 MTLLRRVSFNFPQVLGFTRRSFNSWKSPGESLESSSASTLTHGIHVFQCPLSDCIASKGGNILSVDVFVPENKQVFYSRSEFVFDSVRWPRAEMDEDFRKLSKLFNAMKSIVRVPNLDPKYKISVLASKQDHCLVDLLHGWQDGRLPVDITCVISNHNRDPNTHVIRFLERHGIPYHHLRTAAGNKREAEILDLVQNTDFLVLARYMQILSGNFLESYGKDVINIHHGLLPSFKGGNPSRQAFDAGVKLIGATSHFVTEELDAGPIIEQMPQAGFKTYLLVESLEENVPEFSMPMMETRKHEHFYFISYKVEARVERVSHRDNLRSFVQKSENLEKQCLAKAVRSYCELRVLPYEEIKTVVF 362
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi21g00650 362 Gene3D - 105 360 - -
Tesi21g00650 362 PANTHER FORMYLTETRAHYDROFOLATE DEFORMYLASE 311 362 IPR004810 GO:0006189(InterPro)|GO:0008864(InterPro)
Tesi21g00650 362 SUPERFAMILY Formyltransferase 122 271 IPR036477 GO:0009058(InterPro)
Tesi21g00650 362 PRINTS Formyltetrahydrofolate deformylase signature 122 144 IPR004810 GO:0006189(InterPro)|GO:0008864(InterPro)
Tesi21g00650 362 PRINTS Formyltetrahydrofolate deformylase signature 144 171 IPR004810 GO:0006189(InterPro)|GO:0008864(InterPro)
Tesi21g00650 362 Pfam Formyl transferase 122 269 IPR002376 GO:0009058(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi21g00650 K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10]