Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi21g00661 | ATGACACACATTGTTAACCTTCACATGAAATGTGTGATATGGTGGATGCAGCAGGAGTGCGTTTTCAGTGTCTACGTAAAGACAGGATCTGTCCTCAAGGCAGGAACAGACTCCAGGATCAGCTTGACCCTCGGTGATGCCGCCGGCCGATCGGTGCAGGTGCCTGACCTGGAGGGTTGGGGCCTGATGGGACCAGGCTACGACTACTACGAGAGGAGCAACCTTGATATATTCAGTGGGCGTGGTCCATGCATAGGTGCACCACTCTGCAGCCTCAACTTAACGTCGGACGGGTTAGGAGCTCACCATGGCTGGTACTGTGACTATGTGGAGGTAACATCGACCGGGCCTCACAAGGACTGTAGCCAGACCATCTTCTACGTCGACCAGTGGCTCGCCGCCGACGCTTCTCCTTATCAGCTGACTGCACTTCTGAATGGCTGCAAACAACATACTACTGCACCAGAGATTGCTAGAACTGGGCACTTTGTTGTTGGGAACCATTTAGGATCTGCTTCACAGTAA | 525 | 52.95 | MTHIVNLHMKCVIWWMQQECVFSVYVKTGSVLKAGTDSRISLTLGDAAGRSVQVPDLEGWGLMGPGYDYYERSNLDIFSGRGPCIGAPLCSLNLTSDGLGAHHGWYCDYVEVTSTGPHKDCSQTIFYVDQWLAADASPYQLTALLNGCKQHTTAPEIARTGHFVVGNHLGSASQ | 174 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi21g00661 | 174 | PANTHER | PLAT DOMAIN-CONTAINING PROTEIN | 17 | 153 | - | - | |
| Tesi21g00661 | 174 | ProSiteProfiles | PLAT domain profile. | 20 | 146 | IPR001024 | GO:0005515(InterPro) | |
| Tesi21g00661 | 174 | Gene3D | PLAT-LH2 domain | 21 | 139 | - | - | |
| Tesi21g00661 | 174 | Pfam | Embryo-specific protein 3, (ATS3) | 16 | 120 | IPR010417 | - | |
| Tesi21g00661 | 174 | SUPERFAMILY | Lipase-lipooxygenase domain (PLAT-LH2 domain) | 17 | 140 | IPR036392 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi21g00661 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr21:13966799 | Tesi6g00571 | Tesi-Chr6:29255023 | dispersed | |
| Tesi | Tesi-Chr21:13966799 | Tesi5g00370 | Tesi-Chr5:32559829 | transposed |