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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi21g00662 ATGCGTGGACACGCGTACGGTATAGATCGAGGTCATTATCGTCCTTCGAGTTATGGACTGGTCTATAAGTACAGAAGGCCTGGTACTTCATCTTCTTCGCTTGAATTCTTGCGTTCTGCTACTCTGCCGGAAATTCTTCTCACCGACGGTCTGCTGCTCTGCTCTTCTCTCTTCTCTTACTGTGCTCCTTGCTTCCTAGATATACAGTTTTTGCAATCGAAGGACGAGGCCACTCGTTCTGAGGCTGTGGGCATGGAGTTCCCGCTCGGTGAAGAGCTCGAGGTACAAGGAGGGGGGCAACCCCCGTTACCTATTGGATCATCTCCCGTTCTCCTCGAGGCTCCAGCTGAAACTGCTTCCGCCGATCCCGCTATGGAGACAGCGACGGCCATGGAAACAGCAACGGCAATGTCCACAGAGCATACGGAGACAGCGACAGAGAAAGGAATGGCTTTCTTGGGTCGGGACGCCTCACCGGAATTTGACGAAAATGCGAAGATCCCAACTCAAAAAAGCTCCAAGAAAGTTGAAGTAGTGAAGAAAGTGAATGAGATCACAAGGAAACGGCATAAGTGTGAGAAGGAAGAACTTCCACGCCCAGCAACCACGTCCCCCAAAGATATCCAAGTTGCCGCTGCCAAAGCCGCCACTGCCACATATAGTACTGGCCTGAGAAGCCGAGAAGATGATGAAGCTGATCAGCCTAACCAAGCCGAGCTGCCGATATCCCACTCCCACTCCCCGACTACCACTACAACTTCAGATGACACTCAAGAATTGTCCATGGACATTTCTCCATCGGAGAATGATGACACACTGTTCGACCTGCCCGATCTCTTCCTCGACCTCGCCGGTGGAATTAACGGGTTTTGTTATACTTCGTCGTGGCAGCCACCTATAGCTGACTCAGCCGATATCGGATTCCGACTCGAGGAGCCATTCTTGTGGGAGTGCTACTAG 960 51.77 MRGHAYGIDRGHYRPSSYGLVYKYRRPGTSSSSLEFLRSATLPEILLTDGLLLCSSLFSYCAPCFLDIQFLQSKDEATRSEAVGMEFPLGEELEVQGGGQPPLPIGSSPVLLEAPAETASADPAMETATAMETATAMSTEHTETATEKGMAFLGRDASPEFDENAKIPTQKSSKKVEVVKKVNEITRKRHKCEKEELPRPATTSPKDIQVAAAKAATATYSTGLRSREDDEADQPNQAELPISHSHSPTTTTTSDDTQELSMDISPSENDDTLFDLPDLFLDLAGGINGFCYTSSWQPPIADSADIGFRLEEPFLWECY 319
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi21g00662 319 MobiDBLite consensus disorder prediction 238 268 - -
Tesi21g00662 319 MobiDBLite consensus disorder prediction 212 269 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi21g00662 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr21:13996610 Tesi19g00385 Tesi-Chr19:8043035 dispersed
Tesi Tesi-Chr3:39545664 Tesi21g00662 Tesi-Chr21:13996610 transposed
Tesi Tesi-Chr1:7679079 Tesi21g00662 Tesi-Chr21:13996610 wgd
Tesi Tesi-Chr21:13996610 Tesi22g00274 Tesi-Chr22:20723854 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tesi1g00103 . 11 334 CBF gene family AT4G27950 26.686 1.12e-18 84.3
Tesi1g00279 . 15 87 CBF gene family AT5G19790 63.514 7.86e-27 103.0
Tesi1g00281 . 56 231 CBF gene family AT5G52020 55.682 1.83e-53 167.0
Tesi1g00282 . 110 213 CBF gene family AT4G25490 45.872 2.10e-16 69.7
Tesi1g00402 . 25 277 CBF gene family AT1G50680 54.545 1.11e-92 278.0
Tesi1g00886 . 8 238 CBF gene family AT4G17500 53.282 1.50e-76 233.0
Tesi1g01042 . 51 231 CBF gene family AT5G52020 54.645 3.44e-50 160.0
Tesi1g01043 . 52 231 CBF gene family AT5G52020 54.945 1.27e-52 167.0
Tesi1g01044 . 52 231 CBF gene family AT5G52020 54.945 7.57e-49 156.0
Tesi1g01232 . 11 326 CBF gene family AT4G27950 42.56 7.64e-64 203.0
Tesi1g01260 . 18 88 CBF gene family AT1G64380 54.93 5.30e-14 67.8
Tesi1g01262 . 18 88 CBF gene family AT1G64380 54.93 5.10e-14 67.8
Tesi1g01368 . 57 292 CBF gene family AT1G68840 55.882 1.69e-79 248.0
Tesi1g01748 . 13 302 CBF gene family AT4G18450 37.209 1.88e-42 148.0
Tesi1g01788 . 77 185 CBF gene family AT1G53170 34.228 1.12e-09 53.1
Tesi1g01789 . 11 189 CBF gene family AT1G28360 47.826 7.70e-38 134.0
Tesi1g02112 . 1 225 CBF gene family AT1G50640 54.545 1.98e-49 159.0
Tesi2g00268 . 1 329 CBF gene family AT4G36920 64.402 2.13e-129 383.0
Tesi2g00430 . 182 467 CBF gene family AT4G37750 71.181 1.23e-134 405.0
Tesi2g00958 . 128 225 CBF gene family AT1G50640 56.0 6.87e-08 49.3
Tesi2g01297 . 7 130 CBF gene family AT3G15210 56.589 3.84e-39 132.0
Tesi2g01347 . 47 328 CBF gene family AT2G20880 39.844 2.51e-62 203.0
Tesi2g01658 . 210 334 CBF gene family AT1G78080 42.953 8.56e-27 103.0
Tesi2g01719 . 1 78 CBF gene family AT1G12890 63.291 5.37e-28 103.0
Tesi2g01776 . 12 134 CBF gene family AT2G33710 52.857 2.76e-36 130.0
Tesi2g01961 . 50 229 CBF gene family AT1G21910 49.751 4.27e-49 158.0
Tesi2g02083 . 11 105 CBF gene family AT1G71520 64.211 1.78e-36 131.0
Tesi2g02084 . 56 102 CBF gene family AT1G71520 53.191 6.51e-10 52.4
Tesi2g02085 . 6 102 CBF gene family AT1G71520 60.825 3.06e-39 129.0
Tesi2g02086 . 6 100 CBF gene family AT1G71520 63.158 2.14e-39 129.0
Tesi2g02087 . 6 102 CBF gene family AT1G71520 62.887 8.65e-41 132.0
Tesi2g02127 . 4 296 CBF gene family AT1G51120 44.898 7.17e-76 235.0
Tesi2g02143 . 4 296 CBF gene family AT1G51120 44.898 7.17e-76 235.0
Tesi3g00099 . 111 382 CBF gene family AT4G13620 42.593 2.76e-67 217.0
Tesi3g00444 . 13 82 CBF gene family AT4G18450 36.0 3.22e-06 45.1
Tesi3g00662 . 1 196 CBF gene family AT5G44210 42.979 5.49e-44 144.0
Tesi3g00663 . 1 186 CBF gene family AT1G28360 47.423 5.89e-44 142.0
Tesi3g00759 . 24 269 CBF gene family AT4G28140 38.692 4.92e-54 181.0
Tesi4g00155 . 53 199 CBF gene family AT1G15360 52.258 9.29e-36 120.0
Tesi4g00299 . 18 218 CBF gene family AT5G11590 59.701 3.54e-74 223.0
Tesi4g00425 . 1 181 CBF gene family AT5G25190 67.196 8.23e-82 238.0
Tesi4g00506 . 14 343 CBF gene family AT1G16060 53.714 1.35e-99 295.0
Tesi4g00547 . 6 174 CBF gene family AT5G25190 49.412 1.18e-50 157.0
Tesi4g00824 . 73 131 CBF gene family AT3G16770 79.661 3.35e-27 102.0
Tesi4g01031 . 5 317 CBF gene family AT1G68550 36.416 2.87e-46 157.0
Tesi4g01269 . 59 237 CBF gene family AT3G54320 77.654 7.89e-90 277.0
Tesi4g01354 . 19 95 CBF gene family AT5G19790 73.75 1.65e-32 121.0
Tesi4g01521 . 55 272 CBF gene family AT1G24590 39.1 4.59e-44 153.0
Tesi4g01647 . 27 334 CBF gene family AT1G50680 51.582 1.23e-96 290.0
Tesi4g01699 . 33 173 CBF gene family AT5G61890 54.73 8.25e-45 149.0
Tesi4g01720 . 2 173 CBF gene family AT5G61890 52.432 1.30e-47 158.0
Tesi5g00114 . 50 229 CBF gene family AT1G21910 51.813 2.20e-44 157.0
Tesi5g00365 . 207 334 CBF gene family AT1G78080 44.521 4.32e-24 97.4
Tesi5g00425 . 150 246 CBF gene family AT4G36920 62.626 1.92e-25 99.8
Tesi5g00548 . 174 478 CBF gene family AT4G37750 57.988 6.04e-113 350.0
Tesi5g00666 . 1 330 CBF gene family AT4G36920 63.661 3.60e-123 365.0
Tesi6g00112 . 1 229 CBF gene family AT1G21910 42.857 1.09e-43 144.0
Tesi6g00280 . 81 182 CBF gene family AT1G71450 37.963 5.63e-13 60.1
Tesi6g00286 . 11 136 CBF gene family AT1G71520 48.993 1.73e-39 129.0
Tesi6g00292 . 11 136 CBF gene family AT1G71520 48.993 9.52e-40 130.0
Tesi6g00563 . 1 333 CBF gene family AT1G78080 46.917 1.70e-85 261.0
Tesi6g00714 . 1 508 CBF gene family AT5G10510 54.771 3.74e-147 432.0
Tesi6g00835 . 1 467 CBF gene family AT4G37750 54.545 9.11e-171 498.0
Tesi6g00984 . 1 330 CBF gene family AT4G36920 59.231 1.85e-116 349.0
Tesi7g00118 . 8 60 CBF gene family AT2G40340 50.877 7.64e-08 50.8
Tesi7g00328 . 1 447 CBF gene family AT2G28550 49.304 9.64e-113 339.0
Tesi7g00783 . 126 220 CBF gene family AT5G51990 36.082 1.12e-10 55.5
Tesi7g01038 . 27 389 CBF gene family AT3G54320 51.482 1.75e-107 320.0
Tesi7g01324 . 29 413 CBF gene family AT2G41710 59.85 5.43e-136 394.0
Tesi7g01395 . 1 453 CBF gene family AT1G51190 48.024 9.07e-130 397.0
Tesi8g00633 . 23 85 CBF gene family AT1G50640 88.889 6.26e-31 119.0
Tesi8g00687 . 17 138 CBF gene family AT3G23230 60.902 3.77e-42 140.0
Tesi8g00688 . 17 139 CBF gene family AT3G23230 30.081 1.01e-08 48.9
Tesi8g00689 . 1 218 CBF gene family AT3G23240 35.426 4.21e-23 90.1
Tesi8g00918 . 100 382 CBF gene family AT4G13620 44.512 2.64e-71 227.0
Tesi8g00948 . 111 201 CBF gene family AT4G13040 76.923 6.93e-46 152.0
Tesi8g01043 . 1 584 CBF gene family AT5G17430 41.94 1.03e-143 431.0
Tesi8g01159 . 217 318 CBF gene family AT5G17430 58.824 2.56e-29 115.0
Tesi9g00022 . 27 186 CBF gene family AT4G31060 45.062 7.76e-40 134.0
Tesi9g00191 . 84 558 CBF gene family AT5G57390 57.202 5.15e-161 467.0
Tesi9g00361 . 20 343 CBF gene family AT1G16060 62.463 2.11e-120 348.0
Tesi9g00446 . 1 179 CBF gene family AT5G25190 48.387 2.76e-48 152.0
Tesi9g00533 . 53 199 CBF gene family AT1G15360 54.967 6.96e-39 129.0
Tesi9g00761 . 24 235 CBF gene family AT5G11590 61.778 7.82e-79 236.0
Tesi9g00970 . 1 411 CBF gene family AT1G72570 52.532 3.00e-139 408.0
Tesi9g01013 . 74 185 CBF gene family AT1G19210 36.22 1.73e-09 51.6
Tesi9g01047 . 1 358 CBF gene family AT1G53910 48.01 1.43e-79 246.0
Tesi10g00500 . 16 317 CBF gene family AT1G68550 33.815 3.48e-45 155.0
Tesi10g00527 . 1 343 CBF gene family AT1G13260 61.878 4.12e-143 407.0
Tesi10g00820 . 280 367 CBF gene family AT5G57390 60.227 1.14e-30 119.0
Tesi10g00898 . 19 95 CBF gene family AT5G19790 73.75 6.39e-32 119.0
Tesi10g01148 . 55 238 CBF gene family AT1G24590 40.891 2.32e-40 143.0
Tesi10g01345 . 46 300 CBF gene family AT1G51120 62.646 4.10e-101 300.0
Tesi11g00120 . 238 331 CBF gene family AT2G40340 29.73 3.13e-06 44.7
Tesi11g00171 . 43 318 CBF gene family AT2G40220 42.199 1.36e-43 149.0
Tesi11g00543 . 1 429 CBF gene family AT2G28550 47.801 1.47e-102 315.0
Tesi11g01353 . 40 574 CBF gene family AT3G20840 54.348 5.42e-164 486.0
Tesi12g00103 . 86 238 CBF gene family AT5G47230 46.012 6.04e-32 118.0
Tesi12g00104 . 86 238 CBF gene family AT5G47230 46.012 4.93e-33 120.0
Tesi12g00497 . 10 183 CBF gene family AT2G36450 64.0 3.09e-55 175.0
Tesi12g00610 . 62 97 CBF gene family AT4G17500 55.556 1.18e-06 48.9
Tesi12g00687 . 1 429 CBF gene family AT2G28550 48.902 2.12e-104 320.0
Tesi12g01027 . 1 319 CBF gene family AT2G40340 40.698 3.23e-66 209.0
Tesi13g00027 . 12 216 CBF gene family AT4G27950 37.037 1.36e-22 92.8
Tesi13g00247 . 1 437 CBF gene family AT2G28550 46.704 2.12e-103 317.0
Tesi13g01085 . 9 566 CBF gene family AT3G20840 39.203 8.79e-111 346.0
Tesi14g00228 . 1 444 CBF gene family AT5G17430 49.811 5.52e-144 431.0
Tesi14g00326 . 111 201 CBF gene family AT4G13040 73.626 1.68e-45 150.0
Tesi14g00515 . 80 160 CBF gene family AT4G17490 37.805 9.48e-11 57.8
Tesi14g00573 . 1 218 CBF gene family AT3G23240 56.951 7.52e-78 231.0
Tesi14g00574 . 17 136 CBF gene family AT3G23230 66.129 1.26e-47 149.0
Tesi14g00575 . 17 138 CBF gene family AT3G23230 62.295 4.03e-44 139.0
Tesi14g00891 . 128 158 CBF gene family AT2G47520 64.516 6.49e-07 45.4
Tesi15g00318 . 1 181 CBF gene family AT5G25190 64.433 5.36e-79 231.0
Tesi15g00463 . 53 199 CBF gene family AT1G15360 57.432 3.28e-40 132.0
Tesi15g00658 . 10 235 CBF gene family AT5G11590 56.356 5.18e-73 221.0
Tesi15g00900 . 12 160 CBF gene family AT1G19210 52.0 6.48e-46 160.0
Tesi15g00933 . 1 358 CBF gene family AT1G53910 43.25 2.04e-65 209.0
Tesi16g00236 . 19 201 CBF gene family AT4G13040 44.737 2.51e-45 150.0
Tesi16g00313 . 121 382 CBF gene family AT4G13620 46.452 2.37e-74 234.0
Tesi16g00488 . 1 218 CBF gene family AT3G23240 58.929 1.30e-82 243.0
Tesi16g00489 . 47 80 CBF gene family AT3G23230 67.647 2.01e-07 47.0
Tesi17g00441 . 86 238 CBF gene family AT5G47230 44.785 6.26e-32 117.0
Tesi17g00507 . 78 196 CBF gene family AT5G44210 29.252 1.88e-06 44.3
Tesi17g00800 . 120 225 CBF gene family AT1G50640 54.545 1.78e-06 42.7
Tesi18g00268 . 1 343 CBF gene family AT1G13260 64.641 2.15e-149 423.0
Tesi18g00315 . 18 80 CBF gene family AT5G19790 69.841 2.42e-26 100.0
Tesi18g00607 . 20 116 CBF gene family AT1G68550 32.0 4.79e-06 44.7
Tesi18g00726 . 53 245 CBF gene family AT3G54320 74.359 2.88e-94 288.0
Tesi18g01154 . 71 121 CBF gene family AT4G37750 50.98 2.26e-09 54.7
Tesi18g01235 . 66 203 CBF gene family AT5G13910 35.135 2.07e-14 67.0
Tesi19g00025 . 1 358 CBF gene family AT1G53910 46.098 4.00e-74 233.0
Tesi19g00042 . 2 185 CBF gene family AT1G19210 50.0 1.41e-50 160.0
Tesi19g00043 . 6 149 CBF gene family AT5G21960 49.306 1.28e-41 138.0
Tesi19g00085 . 1 411 CBF gene family AT1G72570 46.693 8.66e-111 336.0
Tesi19g00275 . 18 219 CBF gene family AT5G11590 61.165 4.61e-73 221.0
Tesi19g00460 . 1 199 CBF gene family AT1G15360 55.556 1.19e-73 220.0
Tesi19g00461 . 52 199 CBF gene family AT1G15360 52.98 3.66e-42 137.0
Tesi19g00523 . 1 179 CBF gene family AT5G25190 61.17 7.25e-69 206.0
Tesi19g00606 . 39 343 CBF gene family AT1G16060 64.984 7.23e-124 357.0
Tesi19g00705 . 68 558 CBF gene family AT5G57390 55.424 2.80e-159 461.0
Tesi19g00856 . 55 85 CBF gene family AT4G31060 67.742 1.17e-08 48.1
Tesi20g00185 . 1 248 CBF gene family AT3G16770 43.956 2.16e-54 173.0
Tesi20g00321 . 1 247 CBF gene family AT5G18560 46.8 1.12e-54 181.0
Tesi20g00612 . 7 197 CBF gene family AT5G44210 39.378 1.52e-32 114.0
Tesi20g00649 . 17 136 CBF gene family AT3G23230 64.286 9.57e-46 144.0
Tesi20g00650 . 1 218 CBF gene family AT3G23240 58.036 2.05e-81 240.0
Tesi20g00753 . 12 121 CBF gene family AT1G75490 68.182 8.32e-44 145.0
Tesi20g00878 . 111 154 CBF gene family AT4G13040 79.545 5.32e-18 81.6
Tesi21g00164 . 8 161 CBF gene family AT1G01250 59.74 2.10e-53 167.0
Tesi21g00238 . 11 334 CBF gene family AT4G27950 40.0 5.86e-63 202.0
Tesi21g00458 . 5 87 CBF gene family AT5G19790 62.651 1.17e-29 112.0
Tesi21g00662 . 161 292 CBF gene family AT2G44940 33.562 1.95e-10 59.3
Tesi21g00697 . 1 300 CBF gene family AT5G47230 39.607 3.62e-56 183.0
Tesi21g00698 . 1 300 CBF gene family AT5G47230 40.23 1.50e-58 189.0
Tesi21g00699 . 1 300 CBF gene family AT5G47230 40.643 1.04e-57 187.0
Tesi21g00700 . 1 300 CBF gene family AT5G47230 40.456 3.20e-59 190.0
Tesi21g00701 . 1 300 CBF gene family AT5G47230 40.171 2.83e-58 188.0
Tesi21g00702 . 1 300 CBF gene family AT5G47230 40.462 3.62e-57 186.0
Tesi21g00704 . 175 261 CBF gene family AT5G07580 65.556 8.18e-36 127.0
Tesi21g00705 . 8 149 CBF gene family AT4G17500 40.845 1.50e-24 94.4
Tesi21g00782 . 110 213 CBF gene family AT4G25490 43.636 8.01e-15 65.5
Tesi21g00784 . 110 213 CBF gene family AT4G25490 41.593 6.61e-14 63.2
Tesi21g00786 . 103 222 CBF gene family AT5G51990 33.071 7.25e-13 61.2
Tesi21g00788 . 1 216 CBF gene family AT4G25470 53.448 4.66e-69 209.0
Tesi21g00789 . 1 216 CBF gene family AT4G25470 51.931 1.89e-66 202.0
Tesi22g00274 . 157 292 CBF gene family AT2G44940 39.706 1.63e-13 65.5
Tesi22g00482 . 13 216 CBF gene family AT4G25470 60.377 2.62e-79 236.0
Tesi22g00483 . 59 231 CBF gene family AT5G52020 61.714 9.17e-57 177.0
Tesi22g00727 . 11 335 CBF gene family AT4G27950 39.943 1.64e-60 195.0
Tesi23g00096 . 66 203 CBF gene family AT5G13910 36.723 8.94e-13 62.4
Tesi23g00420 . 53 269 CBF gene family AT3G54320 60.36 1.37e-71 237.0
Tesi23g00495 . 1 361 CBF gene family AT1G25560 60.724 2.62e-147 419.0
Tesi24g00017 . 70 182 CBF gene family AT1G33760 42.975 4.25e-17 71.2
Tesi24g00289 . 70 142 CBF gene family AT2G33710 78.082 7.68e-34 122.0
Tesi24g00290 . 1 86 CBF gene family AT5G64750 39.56 1.74e-06 45.1
Tesi24g00380 . 216 334 CBF gene family AT1G78080 38.621 8.61e-20 84.3
Tesi24g00387 . 216 334 CBF gene family AT1G78080 39.31 1.27e-20 86.7
Tesi24g00672 . 1 347 CBF gene family AT4G36920 62.141 6.25e-126 369.0
Tesi24g00769 . 66 500 CBF gene family AT4G37750 53.15 2.08e-157 463.0