AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi21g00667 ATGGAGTCACCGGAAACCCAAATCCTAAACGGAGACCAAGATCGATTTCAGCAGAACGTGATCGTCATGAGACACGGTGATCGGCTCGACAACGTTGAGCGGCTGTGGCTAGCAACGGCAGCAAGACCTTGGAACCCACCTCTGGCGAACAGTGGCAGGGAGAGAGCTTTCGGCGTCGGTAAATATCTCCGATCAAATCTAGGTTTTCCGATCCATAGAGTGTTCGTCTCGCCTTTCCTCCGATGCGTTCAGACCGCTGCCGAGGTCGTCTCGGCTCTATGCGCCGTCGAAGTTAAGGCCTCTCAGATGATCAGCGATAACGTAGCAATCGATTCTTCCAAGATCAAGGTCTCAGTTGAGTATGGATTGTGTGAGATCATAGGTAGAGATGCTATAAGACTTGATGTGGCACCCAAAGATGGGAAATGGGGTTTCAATATCTCAGAGCTTCAAGCTCTGTTACCAGCTGGAACAGTGGATCATTCTGTGCAGTCTGTCTATAAAGAGTTGCCAAAATGGGAGGAATCAGCAATGGATGCGGGGGCTAGATACAAAAAGGTTATTCAGGCGCTTGCGGATAAATTTCCTTCTGAAAACTTGTTGCTTGTTACACACGGTGAAGGGGTCATGGTTGCACTTTCTGAATTCTTGAAGGACCCAACTGAGTCTAAAGATCCTAAATGCGCTAGACCTGATTATTGTGCATATTTGCGCTTACAAAGACTAATCTCCTTCAGCCCAAGCAGGGAATATACTGCCGGAAACTTTGAGTTACTTACAGAGAGTGGTATAAGCTACTGCCCCAGAAGAGCTGGCCAGTGA 822 48.05 MESPETQILNGDQDRFQQNVIVMRHGDRLDNVERLWLATAARPWNPPLANSGRERAFGVGKYLRSNLGFPIHRVFVSPFLRCVQTAAEVVSALCAVEVKASQMISDNVAIDSSKIKVSVEYGLCEIIGRDAIRLDVAPKDGKWGFNISELQALLPAGTVDHSVQSVYKELPKWEESAMDAGARYKKVIQALADKFPSENLLLVTHGEGVMVALSEFLKDPTESKDPKCARPDYCAYLRLQRLISFSPSREYTAGNFELLTESGISYCPRRAGQ 273
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi21g00667 273 SUPERFAMILY Phosphoglycerate mutase-like 19 239 IPR029033 -
Tesi21g00667 273 CDD HP-PGM-like 19 239 IPR013078 -
Tesi21g00667 273 Gene3D - 15 242 IPR029033 -
Tesi21g00667 273 PANTHER UBIQUITIN-ASSOCIATED AND SH3 DOMAIN-CONTAINING BA-RELATED 19 260 IPR051710 -
Tesi21g00667 273 Pfam Histidine phosphatase superfamily (branch 1) 166 222 IPR013078 -
Tesi21g00667 273 Pfam Histidine phosphatase superfamily (branch 1) 20 93 IPR013078 -
Tesi21g00667 273 SMART PGAM-5 19 213 IPR013078 -
Tesi21g00667 273 FunFam Phosphoglycerate mutase family protein 16 245 - -
Tesi21g00667 273 PIRSF PRIB5 1 272 IPR012398 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi21g00667 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr1:20604723 Tesi21g00667 Tesi-Chr21:14144062 wgd