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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi21g00709 ATGGCTGATCGCCCACAACATCAACCCCCACCACCACGATCACATCAGGTGGTCAAGGCTGCTACAGCAGTCACCGCTGGTGGGTCCCTTCTGGTTCTCTCCGGTCTGACACTCGCCGGAACTGTGATAGCACTGACGTTGGCGACGCCGGTGCTGGTGATATTCAGTCCGGTGCTGGTCCCGGCGGCGATAACGGTGTTTCTGTTGATGACAGGATTTGTGGCGTCAGGGGGATTCGGTGTAGCGGCGGTGTCGGTGCTGTCGTGGATATACAAGTACGTGACGGGAAAGCACCCGCCTGGTGCAGACCAGCTTGACCATGCACGCATGAGGCTTGCGAGTAAGGCTAGGGACATGAAGGAGCAGATTGGGCAGCACCATCTTGGGGGTGCGCAGGCTTCTTAA 405 58.52 MADRPQHQPPPPRSHQVVKAATAVTAGGSLLVLSGLTLAGTVIALTLATPVLVIFSPVLVPAAITVFLLMTGFVASGGFGVAAVSVLSWIYKYVTGKHPPGADQLDHARMRLASKARDMKEQIGQHHLGGAQAS 134
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi21g00709 134 PANTHER OLEOSIN 12 126 IPR000136 GO:0005576(PANTHER)|GO:0012511(InterPro)|GO:0016020(InterPro)|GO:0019915(PANTHER)|GO:0019953(PANTHER)
Tesi21g00709 134 Pfam Oleosin 15 125 IPR000136 GO:0012511(InterPro)|GO:0016020(InterPro)
Tesi21g00709 134 ProSitePatterns Oleosins signature. 40 62 IPR000136 GO:0012511(InterPro)|GO:0016020(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi21g00709 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr10:39514501 Tesi21g00709 Tesi-Chr21:15250079 dispersed
Tesi Tesi-Chr21:15250079 Tesi4g01495 Tesi-Chr4:52997752 dispersed
Tesi Tesi-Chr19:5040801 Tesi21g00709 Tesi-Chr21:15250079 transposed
Tesi Tesi-Chr1:7976595 Tesi21g00709 Tesi-Chr21:15250079 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tesi1g00021 . 1 295 Lipid Metabolism gene family AT4G22750 52.322 3.61e-100 295.0
Tesi1g00216 . 3 1011 Lipid Metabolism gene family AT4G11610 69.156 0.0 1500.0
Tesi1g00325 . 1 159 Lipid Metabolism gene family AT4G22750 65.089 1.93e-72 219.0
Tesi1g00400 . 43 155 Lipid Metabolism gene family AT4G25140 70.796 1.75e-44 157.0
Tesi1g00442 . 8 80 Lipid Metabolism gene family AT5G60510 47.297 2.59e-16 70.1
Tesi1g00474 . 81 426 Lipid Metabolism gene family AT2G44520 65.181 3.41e-167 476.0
Tesi1g00635 . 256 330 Lipid Metabolism gene family AT5G05580 78.667 5.43e-37 126.0
Tesi1g00989 . 1 297 Lipid Metabolism gene family AT4G22750 63.107 1.81e-130 372.0
Tesi1g00994 . 96 622 Lipid Metabolism gene family AT1G02190 56.309 0.0 599.0
Tesi1g00998 . 1 295 Lipid Metabolism gene family AT4G12110 70.847 2.62e-166 462.0
Tesi1g01025 . 270 359 Lipid Metabolism gene family AT4G00700 37.363 4.83e-09 57.0
Tesi1g01532 . 284 384 Lipid Metabolism gene family AT5G48060 36.19 4.60e-09 58.2
Tesi1g01849 . 9 331 Lipid Metabolism gene family AT4G04930 80.495 0.0 561.0
Tesi1g02127 . 306 423 Lipid Metabolism gene family AT4G22340 80.508 4.31e-65 201.0
Tesi1g02128 . 30 112 Lipid Metabolism gene family AT4G22340 74.699 1.57e-38 134.0
Tesi2g00052 . 1 477 Lipid Metabolism gene family AT2G33630 70.921 0.0 722.0
Tesi2g00820 . 5 270 Lipid Metabolism gene family AT5G60510 45.263 2.37e-80 258.0
Tesi2g00821 . 105 217 Lipid Metabolism gene family AT5G60510 29.508 1.12e-11 58.2
Tesi2g01059 . 296 417 Lipid Metabolism gene family AT1G22610 37.903 6.20e-16 81.3
Tesi2g01672 . 7 167 Lipid Metabolism gene family AT2G13820 47.802 3.25e-45 145.0
Tesi2g01775 . 54 159 Lipid Metabolism gene family AT4G22750 31.092 1.41e-13 69.7
Tesi3g00184 . 1 237 Lipid Metabolism gene family AT2G34770 75.105 3.82e-138 385.0
Tesi3g00361 . 243 366 Lipid Metabolism gene family AT3G61300 29.6 3.24e-09 58.9
Tesi3g00739 . 14 329 Lipid Metabolism gene family AT4G04930 83.861 0.0 567.0
Tesi3g01024 . 29 271 Lipid Metabolism gene family AT4G22750 25.781 4.98e-22 94.0
Tesi3g01094 . 1 419 Lipid Metabolism gene family AT1G62430 69.13 0.0 646.0
Tesi3g01224 . 296 445 Lipid Metabolism gene family AT1G22610 36.774 3.35e-17 85.1
Tesi4g00083 . 42 516 Lipid Metabolism gene family AT2G19450 62.677 0.0 604.0
Tesi4g00518 . 1 625 Lipid Metabolism gene family AT5G57800 69.44 0.0 918.0
Tesi4g00646 . 81 431 Lipid Metabolism gene family AT2G44520 65.668 7.53e-172 488.0
Tesi4g00647 . 320 431 Lipid Metabolism gene family AT2G44520 52.344 4.36e-32 117.0
Tesi4g00680 . 107 159 Lipid Metabolism gene family AT4G22750 50.943 2.64e-13 68.2
Tesi4g00993 . 48 363 Lipid Metabolism gene family AT3G02600 67.988 2.50e-167 469.0
Tesi4g01080 . 10 166 Lipid Metabolism gene family AT3G18570 54.658 3.67e-49 154.0
Tesi4g01358 . 111 159 Lipid Metabolism gene family AT4G22750 42.857 4.52e-08 53.9
Tesi4g01495 . 16 156 Lipid Metabolism gene family AT3G01570 53.521 3.40e-49 154.0
Tesi4g01515 . 296 417 Lipid Metabolism gene family AT1G22610 33.077 7.41e-12 67.8
Tesi4g01566 . 1 318 Lipid Metabolism gene family AT1G67730 66.875 1.65e-169 471.0
Tesi4g01672 . 50 260 Lipid Metabolism gene family AT4G22750 29.185 1.76e-19 87.0
Tesi5g00298 . 54 260 Lipid Metabolism gene family AT4G22750 30.263 7.75e-18 82.0
Tesi5g00355 . 34 179 Lipid Metabolism gene family AT5G64080 52.74 2.13e-46 147.0
Tesi5g00356 . 34 179 Lipid Metabolism gene family AT5G64080 52.74 1.08e-45 146.0
Tesi5g00495 . 177 218 Lipid Metabolism gene family AT4G12110 50.0 1.50e-07 45.1
Tesi5g00979 . 246 497 Lipid Metabolism gene family AT3G61300 27.536 8.80e-13 69.7
Tesi5g01053 . 118 248 Lipid Metabolism gene family AT4G22750 28.244 2.86e-11 62.0
Tesi6g00251 . 1 1029 Lipid Metabolism gene family AT1G22610 66.313 0.0 1379.0
Tesi6g00270 . 52 139 Lipid Metabolism gene family AT1G24470 34.444 1.11e-06 50.1
Tesi6g00549 . 35 135 Lipid Metabolism gene family AT5G64080 66.337 9.12e-44 142.0
Tesi6g00700 . 74 399 Lipid Metabolism gene family AT3G01380 24.629 3.30e-12 68.9
Tesi6g01409 . 247 503 Lipid Metabolism gene family AT3G61300 30.435 1.74e-13 72.0
Tesi6g01571 . 117 158 Lipid Metabolism gene family AT4G22750 45.238 2.90e-07 50.8
Tesi6g01617 . 146 231 Lipid Metabolism gene family AT1G67730 58.14 2.33e-27 100.0
Tesi7g00188 . 1 433 Lipid Metabolism gene family AT5G05580 70.536 0.0 642.0
Tesi7g00244 . 1 303 Lipid Metabolism gene family AT2G34980 74.342 7.17e-138 396.0
Tesi7g00343 . 103 296 Lipid Metabolism gene family AT2G39290 63.866 1.80e-92 276.0
Tesi7g00492 . 28 256 Lipid Metabolism gene family AT4G22750 34.146 1.00e-30 116.0
Tesi7g00525 . 144 243 Lipid Metabolism gene family AT1G07420 93.0 2.56e-67 201.0
Tesi7g00526 . 56 145 Lipid Metabolism gene family AT1G07420 84.444 1.78e-53 166.0
Tesi7g01013 . 1 1017 Lipid Metabolism gene family AT3G03680 71.205 0.0 1466.0
Tesi7g01039 . 20 147 Lipid Metabolism gene family AT3G43720 49.618 5.02e-29 104.0
Tesi7g01421 . 112 154 Lipid Metabolism gene family AT5G06850 69.767 2.12e-16 71.6
Tesi8g00032 . 302 327 Lipid Metabolism gene family AT5G05580 73.077 1.98e-06 48.9
Tesi8g00396 . 28 159 Lipid Metabolism gene family AT4G22750 33.582 2.72e-13 68.2
Tesi8g00428 . 253 397 Lipid Metabolism gene family AT5G05580 60.69 1.46e-47 159.0
Tesi9g00082 . 23 91 Lipid Metabolism gene family AT4G29460 48.718 2.29e-18 75.9
Tesi9g00334 . 17 627 Lipid Metabolism gene family AT5G57800 71.195 0.0 915.0
Tesi9g00473 . 116 157 Lipid Metabolism gene family AT4G22750 50.0 5.47e-10 58.2
Tesi9g00489 . 41 298 Lipid Metabolism gene family AT1G51570 25.436 2.48e-11 63.2
Tesi9g00602 . 1 327 Lipid Metabolism gene family AT5G19980 74.242 6.79e-176 489.0
Tesi10g00113 . 117 177 Lipid Metabolism gene family AT4G22750 52.459 3.82e-13 65.5
Tesi10g00437 . 48 355 Lipid Metabolism gene family AT3G02600 68.77 2.83e-160 466.0
Tesi10g00457 . 74 274 Lipid Metabolism gene family AT3G02580 79.104 3.81e-123 350.0
Tesi10g00485 . 41 291 Lipid Metabolism gene family AT3G57880 30.159 5.00e-14 74.3
Tesi10g00541 . 10 166 Lipid Metabolism gene family AT3G18570 52.174 1.01e-46 148.0
Tesi10g00650 . 1 237 Lipid Metabolism gene family AT2G34770 69.412 4.26e-132 371.0
Tesi10g00831 . 4 370 Lipid Metabolism gene family AT1G76340 78.552 0.0 577.0
Tesi10g01117 . 9 156 Lipid Metabolism gene family AT3G01570 56.757 4.10e-53 164.0
Tesi10g01381 . 60 260 Lipid Metabolism gene family AT4G22750 28.571 1.06e-17 80.9
Tesi11g00196 . 2 433 Lipid Metabolism gene family AT5G05580 74.889 0.0 698.0
Tesi11g00222 . 22 264 Lipid Metabolism gene family AT5G60510 31.579 3.79e-30 114.0
Tesi11g00345 . 1 261 Lipid Metabolism gene family AT1G07420 85.824 1.67e-172 475.0
Tesi11g00666 . 47 159 Lipid Metabolism gene family AT4G22750 33.582 3.58e-21 88.6
Tesi11g01097 . 45 160 Lipid Metabolism gene family AT4G22750 32.308 1.01e-12 66.2
Tesi11g01101 . 45 160 Lipid Metabolism gene family AT4G22750 32.308 1.01e-12 66.2
Tesi11g01375 . 6 1036 Lipid Metabolism gene family AT5G48060 65.438 0.0 1430.0
Tesi11g01382 . 1 763 Lipid Metabolism gene family AT3G57880 86.423 0.0 1408.0
Tesi11g01427 . 1 383 Lipid Metabolism gene family AT3G12120 76.762 0.0 633.0
Tesi12g00106 . 1 383 Lipid Metabolism gene family AT3G12120 74.935 0.0 627.0
Tesi12g00137 . 1 773 Lipid Metabolism gene family AT3G57880 85.438 0.0 1409.0
Tesi12g00141 . 6 1036 Lipid Metabolism gene family AT5G48060 65.784 0.0 1411.0
Tesi12g00994 . 3 433 Lipid Metabolism gene family AT5G05580 67.544 0.0 634.0
Tesi13g00129 . 1 433 Lipid Metabolism gene family AT5G05580 64.64 0.0 595.0
Tesi13g00157 . 1 303 Lipid Metabolism gene family AT2G34980 70.395 7.92e-135 382.0
Tesi13g00261 . 104 296 Lipid Metabolism gene family AT2G39290 83.673 1.33e-114 332.0
Tesi13g00737 . 1 1049 Lipid Metabolism gene family AT5G17980 62.878 0.0 1370.0
Tesi13g00853 . 45 158 Lipid Metabolism gene family AT4G22750 32.812 5.03e-13 67.8
Tesi13g01099 . 9 794 Lipid Metabolism gene family AT5G06850 77.001 0.0 1337.0
Tesi14g00042 . 75 217 Lipid Metabolism gene family AT2G33630 35.417 3.09e-14 70.9
Tesi14g00198 . 7 227 Lipid Metabolism gene family AT1G68000 66.063 1.12e-106 305.0
Tesi14g00673 . 22 173 Lipid Metabolism gene family AT2G48140 50.311 1.44e-41 138.0
Tesi14g01041 . 104 237 Lipid Metabolism gene family AT4G22750 28.472 1.34e-10 61.2
Tesi15g00203 . 1 627 Lipid Metabolism gene family AT5G57800 69.219 0.0 922.0
Tesi15g00356 . 116 157 Lipid Metabolism gene family AT4G22750 50.0 7.75e-10 58.5
Tesi15g00389 . 41 298 Lipid Metabolism gene family AT1G51570 27.562 3.03e-12 67.8
Tesi15g00524 . 1 339 Lipid Metabolism gene family AT5G19980 71.802 3.77e-172 485.0
Tesi15g00839 . 42 516 Lipid Metabolism gene family AT2G19450 63.495 0.0 647.0
Tesi16g00372 . 10 1012 Lipid Metabolism gene family AT1G04150 62.977 0.0 1291.0
Tesi16g00390 . 10 1012 Lipid Metabolism gene family AT1G04150 62.88 0.0 1287.0
Tesi16g00659 . 10 170 Lipid Metabolism gene family AT3G22600 44.785 3.12e-36 121.0
Tesi17g00086 . 129 158 Lipid Metabolism gene family AT4G22750 53.333 1.20e-06 48.5
Tesi17g00621 . 203 431 Lipid Metabolism gene family AT5G05580 44.726 7.75e-53 178.0
Tesi17g00888 . 296 417 Lipid Metabolism gene family AT1G22610 37.097 5.42e-14 74.7
Tesi18g00282 . 58 166 Lipid Metabolism gene family AT3G18570 57.522 7.52e-37 122.0
Tesi18g00560 . 1 289 Lipid Metabolism gene family AT1G15080 80.345 2.58e-173 480.0
Tesi18g00561 . 50 363 Lipid Metabolism gene family AT3G02600 68.634 4.07e-165 464.0
Tesi18g00574 . 7 269 Lipid Metabolism gene family AT3G02580 78.707 1.48e-163 453.0
Tesi18g00731 . 1 1081 Lipid Metabolism gene family AT1G74720 66.82 0.0 1441.0
Tesi18g01033 . 7 318 Lipid Metabolism gene family AT1G67730 67.308 2.68e-167 466.0
Tesi18g01035 . 14 318 Lipid Metabolism gene family AT1G67730 49.032 1.34e-104 306.0
Tesi18g01246 . 115 160 Lipid Metabolism gene family AT4G22750 47.826 8.48e-13 66.6
Tesi19g00051 . 3 380 Lipid Metabolism gene family AT2G33630 33.586 3.90e-51 181.0
Tesi19g00221 . 253 431 Lipid Metabolism gene family AT5G05580 56.983 1.46e-66 206.0
Tesi19g00222 . 254 330 Lipid Metabolism gene family AT5G05580 80.519 8.28e-39 139.0
Tesi19g00239 . 16 130 Lipid Metabolism gene family AT2G25890 67.826 1.11e-43 140.0
Tesi19g00381 . 1 340 Lipid Metabolism gene family AT5G19980 70.774 3.02e-175 488.0
Tesi20g00516 . 3 170 Lipid Metabolism gene family AT3G22600 52.299 1.47e-50 158.0
Tesi20g00517 . 24 170 Lipid Metabolism gene family AT3G22600 56.863 6.83e-47 154.0
Tesi20g00518 . 3 193 Lipid Metabolism gene family AT2G48140 48.309 9.71e-45 146.0
Tesi20g00750 . 11 1012 Lipid Metabolism gene family AT1G04150 62.949 0.0 1295.0
Tesi20g00948 . 1 622 Lipid Metabolism gene family AT1G02190 55.04 0.0 694.0
Tesi20g00949 . 414 473 Lipid Metabolism gene family AT1G02190 55.0 3.33e-17 72.4
Tesi20g00950 . 183 246 Lipid Metabolism gene family AT2G37700 54.167 9.43e-18 78.6
Tesi20g00952 . 1 622 Lipid Metabolism gene family AT1G02190 57.987 0.0 736.0
Tesi20g00953 . 108 246 Lipid Metabolism gene family AT1G02190 73.381 3.25e-62 199.0
Tesi20g00954 . 1 92 Lipid Metabolism gene family AT1G02190 55.435 8.48e-31 111.0
Tesi21g00122 . 54 247 Lipid Metabolism gene family AT1G67730 28.182 1.50e-10 59.7
Tesi21g00268 . 7 448 Lipid Metabolism gene family AT2G46210 66.817 0.0 654.0
Tesi21g00562 . 1 295 Lipid Metabolism gene family AT4G12110 70.82 1.84e-165 460.0
Tesi21g00565 . 1 297 Lipid Metabolism gene family AT4G22750 64.401 2.67e-131 374.0
Tesi21g00709 . 11 134 Lipid Metabolism gene family AT5G51210 61.24 1.44e-51 158.0
Tesi22g00389 . 1 294 Lipid Metabolism gene family AT4G12110 71.769 4.60e-168 466.0
Tesi22g00562 . 3 1011 Lipid Metabolism gene family AT4G11610 70.583 0.0 1527.0
Tesi22g00603 . 3 1011 Lipid Metabolism gene family AT4G11610 70.388 0.0 1526.0
Tesi22g00696 . 1 449 Lipid Metabolism gene family AT3G61580 61.915 0.0 608.0
Tesi23g00268 . 55 191 Lipid Metabolism gene family AT1G24470 28.947 2.30e-09 55.5
Tesi23g00344 . 13 987 Lipid Metabolism gene family AT3G01380 72.183 0.0 1441.0
Tesi23g00418 . 1 1081 Lipid Metabolism gene family AT1G74720 62.419 0.0 1326.0
Tesi23g00454 . 3 370 Lipid Metabolism gene family AT1G76340 78.61 0.0 585.0
Tesi24g00204 . 884 1120 Lipid Metabolism gene family AT5G64070 91.129 3.03e-152 451.0
Tesi24g00205 . 519 795 Lipid Metabolism gene family AT5G64070 60.131 1.61e-115 359.0
Tesi24g00293 . 117 159 Lipid Metabolism gene family AT4G22750 53.488 1.48e-11 62.4
Tesi24g00535 . 8 270 Lipid Metabolism gene family AT5G60510 45.775 7.31e-81 253.0