AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi21g00729 | ATGAACTGGTTGGGAAAACTAGGGTTAGGGTTTGGTAACAGAGCCACTGATATCTCCATGGATTCTTCTTCTTCTTCGATTGCTCAAGGTCCCGACGACGATATCCCTGCGCCGGGGCAGCAGTTCGCTCAATTCGGCGCCGGATGCTTCTGGGGCGTTGAATTGGCGTTTCAAAGAGTTCCAGGAGTTACAAAGACAGAATCTGGGTACAGTCAAGGGTTTTTGGATAATCCAACTTACAACGATATTTGTACAGGGACCACGAATCATTCCGAGATTGTTAGGGTTCAGTACGATCCCAAGGAGTGTAGTTTCGAGAATTTGCTCGACTTGTTTTGGTCTCGCCATGATCCAACTACGCTTAATCGACAGGGGAGTGATGTGGGTACGCAGTACAGATCGGGAATATACTTCTACACACCTGAGCAGGAGAAAGCGGCACAGGAGTCCTTGGAACGACAGCAGAAGCTCCTGAACAGGAAGATTGTTACTGAGATTCTGCCTGCAAAGAAGTTCTACAGGGCTGAAGAATACCACCAGCAATACCTTTCAAAAGGGGGCCGATTTGGTTTCAAGCAGTCAGCAGATAAAGGCTGCAACGATCCAATCCGATGCTATGGCTAA | 624 | 48.08 | MNWLGKLGLGFGNRATDISMDSSSSSIAQGPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTESGYSQGFLDNPTYNDICTGTTNHSEIVRVQYDPKECSFENLLDLFWSRHDPTTLNRQGSDVGTQYRSGIYFYTPEQEKAAQESLERQQKLLNRKIVTEILPAKKFYRAEEYHQQYLSKGGRFGFKQSADKGCNDPIRCYG | 207 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi21g00729 | 207 | PANTHER | MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE | 24 | 205 | IPR050162 | GO:0005737(PANTHER)|GO:0008113(PANTHER)|GO:0034599(PANTHER)|GO:0036456(PANTHER) | |
| Tesi21g00729 | 207 | SUPERFAMILY | Peptide methionine sulfoxide reductase | 35 | 194 | IPR036509 | GO:0008113(InterPro) | |
| Tesi21g00729 | 207 | Gene3D | Peptide methionine sulphoxide reductase MsrA | 25 | 207 | IPR036509 | GO:0008113(InterPro) | |
| Tesi21g00729 | 207 | Pfam | Peptide methionine sulfoxide reductase | 43 | 185 | IPR002569 | GO:0008113(InterPro) | |
| Tesi21g00729 | 207 | Hamap | Peptide methionine sulfoxide reductase MsrA [msrA]. | 40 | 197 | IPR002569 | GO:0008113(InterPro) | |
| Tesi21g00729 | 207 | NCBIfam | peptide-methionine (S)-S-oxide reductase MsrA | 43 | 185 | IPR002569 | GO:0008113(InterPro) | |
| Tesi21g00729 | 207 | FunFam | Peptide methionine sulfoxide reductase | 30 | 207 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi21g00729 | K07304 | peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr18:33159784 | Tesi21g00729 | Tesi-Chr21:16037756 | transposed | |
| Tesi | Tesi-Chr1:8312628 | Tesi21g00729 | Tesi-Chr21:16037756 | wgd | |
| Tesi | Tesi-Chr1:19629032 | Tesi21g00729 | Tesi-Chr21:16037756 | wgd |