AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi22g00016 | ATGGCAGCTGTTGGGGGAGGAGGAGAAGCATGGAAGGCCCATGCGGCAATGGCGTTGATCCAGATAATCAACGGTGGATACCATGTTATTACCAAAGTGGCCCTCAACGTTGGCATGAACCAGGTCGTCTTCTGCGTCTACCGCGACCTCCTCGCCCTCTCTATTCTCGCTCCCGTTGCCTATCTCCGTGAAAAAAGGGTTCGACTACAGATGACCAGACGCTTCCTAATGTCCTTCTTCTTTCTTGGGTTAACTGGGATATTTGGCAACCAACTTTTGTTTCTACTCGGCCTTAGCTACACAAACCCAACTTATGCTGCAGCCACACAACCTGCAATACCAGTCTTTACATTTATCTTGGCTGCAGTAATGGGAACTGAAGGCCAGGTGAAAGTTGGAGGCACACTCATCTGTGTTTCTGGTGCCATATTAATGGTTCTGTTCAGGGGTCCAGCTGTAGTTGGATACAGTGATTTAGAGCTCACAGCACCAAGCGAGATAAGTGCCAAGGGTCAACCAGAGCCTGCTGGATGGTTAATATCTAGTTTTCTTGAGTTTGGGCTTGAAAAGTGGCACATTGGTGTGTTATGCTTAATAGGGAACTGCATGTGCATGGCAGCTTATCTAGCCATACAGTTTCTGGCTTGTGGGTAA | 654 | 48.17 | MAAVGGGGEAWKAHAAMALIQIINGGYHVITKVALNVGMNQVVFCVYRDLLALSILAPVAYLREKRVRLQMTRRFLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAATQPAIPVFTFILAAVMGTEGQVKVGGTLICVSGAILMVLFRGPAVVGYSDLELTAPSEISAKGQPEPAGWLISSFLEFGLEKWHIGVLCLIGNCMCMAAYLAIQFLACG | 217 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi22g00016 | 217 | Pfam | EamA-like transporter family | 15 | 146 | IPR000620 | GO:0016020(InterPro) | |
| Tesi22g00016 | 217 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 47 | 149 | - | - | |
| Tesi22g00016 | 217 | PANTHER | WAT1-RELATED PROTEIN | 15 | 212 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi22g00016 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr1:11120477 | Tesi22g00016 | Tesi-Chr22:1181670 | dispersed | |
| Tesi | Tesi-Chr22:1181670 | Tesi8g00077 | Tesi-Chr8:1641644 | dispersed | |
| Tesi | Tesi-Chr22:1181670 | Tesi24g00272 | Tesi-Chr24:14679621 | transposed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Tesi1g00024 | . | 21 | 130 | Nodulin-like gene family | AT5G07050 | 46.364 | 3.83e-32 | 115.0 | |
| Tesi1g00534 | . | 1 | 306 | Nodulin-like gene family | AT5G45370 | 66.061 | 1.91e-153 | 433.0 | |
| Tesi1g00589 | . | 8 | 375 | Nodulin-like gene family | AT5G07050 | 33.875 | 5.42e-51 | 171.0 | |
| Tesi1g00590 | . | 68 | 130 | Nodulin-like gene family | AT5G07050 | 41.538 | 6.63e-08 | 49.3 | |
| Tesi2g00599 | . | 14 | 562 | Nodulin-like gene family | AT4G34950 | 68.214 | 0.0 | 779.0 | |
| Tesi2g00700 | . | 1 | 132 | Nodulin-like gene family | AT1G75500 | 80.741 | 4.64e-72 | 219.0 | |
| Tesi2g01799 | . | 1 | 343 | Nodulin-like gene family | AT1G25270 | 45.64 | 1.01e-107 | 320.0 | |
| Tesi2g01800 | . | 1 | 324 | Nodulin-like gene family | AT1G25270 | 46.769 | 4.44e-102 | 308.0 | |
| Tesi2g01801 | . | 1 | 353 | Nodulin-like gene family | AT5G64700 | 45.187 | 1.56e-97 | 293.0 | |
| Tesi2g01814 | . | 8 | 43 | Nodulin-like gene family | AT1G76800 | 59.524 | 2.14e-10 | 54.3 | |
| Tesi2g01815 | . | 13 | 198 | Nodulin-like gene family | AT3G43660 | 73.016 | 8.97e-99 | 283.0 | |
| Tesi4g01159 | . | 213 | 348 | Nodulin-like gene family | AT5G40240 | 51.471 | 4.84e-48 | 157.0 | |
| Tesi4g01160 | . | 32 | 101 | Nodulin-like gene family | AT1G60050 | 47.222 | 4.99e-09 | 56.2 | |
| Tesi4g01161 | . | 198 | 360 | Nodulin-like gene family | AT3G28050 | 47.853 | 2.39e-45 | 154.0 | |
| Tesi5g00106 | . | 114 | 210 | Nodulin-like gene family | AT4G08290 | 38.318 | 1.72e-12 | 67.4 | |
| Tesi5g00109 | . | 5 | 206 | Nodulin-like gene family | AT1G21890 | 49.356 | 4.55e-66 | 212.0 | |
| Tesi5g00110 | . | 1 | 363 | Nodulin-like gene family | AT1G21890 | 60.274 | 2.69e-156 | 444.0 | |
| Tesi5g00237 | . | 11 | 198 | Nodulin-like gene family | AT3G43660 | 66.832 | 2.95e-94 | 272.0 | |
| Tesi5g00238 | . | 10 | 196 | Nodulin-like gene family | AT3G43630 | 39.583 | 8.05e-34 | 119.0 | |
| Tesi5g00254 | . | 1 | 347 | Nodulin-like gene family | AT5G64700 | 41.176 | 1.97e-87 | 268.0 | |
| Tesi5g00255 | . | 3 | 358 | Nodulin-like gene family | AT5G64700 | 51.676 | 9.34e-106 | 311.0 | |
| Tesi5g00280 | . | 1 | 339 | Nodulin-like gene family | AT5G64700 | 40.896 | 5.80e-81 | 250.0 | |
| Tesi5g00284 | . | 3 | 358 | Nodulin-like gene family | AT5G64700 | 49.86 | 2.81e-101 | 300.0 | |
| Tesi5g00860 | . | 1 | 389 | Nodulin-like gene family | AT1G75500 | 66.154 | 6.21e-180 | 501.0 | |
| Tesi6g00107 | . | 7 | 375 | Nodulin-like gene family | AT1G21890 | 54.743 | 5.38e-138 | 397.0 | |
| Tesi6g00422 | . | 1 | 355 | Nodulin-like gene family | AT1G25270 | 43.316 | 2.00e-105 | 314.0 | |
| Tesi6g01606 | . | 13 | 90 | Nodulin-like gene family | AT3G43660 | 61.538 | 1.75e-29 | 108.0 | |
| Tesi7g00086 | . | 1 | 498 | Nodulin-like gene family | AT2G30300 | 49.43 | 1.02e-154 | 449.0 | |
| Tesi7g00135 | . | 1 | 740 | Nodulin-like gene family | AT4G19180 | 60.513 | 0.0 | 879.0 | |
| Tesi7g00684 | . | 24 | 566 | Nodulin-like gene family | AT2G39210 | 70.534 | 0.0 | 801.0 | |
| Tesi7g00685 | . | 2 | 564 | Nodulin-like gene family | AT2G28120 | 66.075 | 0.0 | 770.0 | |
| Tesi7g00686 | . | 2 | 517 | Nodulin-like gene family | AT2G28120 | 57.253 | 0.0 | 563.0 | |
| Tesi7g01136 | . | 3 | 396 | Nodulin-like gene family | AT5G07050 | 65.835 | 0.0 | 525.0 | |
| Tesi8g00077 | . | 1 | 366 | Nodulin-like gene family | AT1G09380 | 58.197 | 8.35e-156 | 441.0 | |
| Tesi9g00335 | . | 1 | 362 | Nodulin-like gene family | AT4G30420 | 48.626 | 3.42e-114 | 336.0 | |
| Tesi9g00470 | . | 7 | 561 | Nodulin-like gene family | AT1G80530 | 62.124 | 0.0 | 729.0 | |
| Tesi10g00282 | . | 2 | 193 | Nodulin-like gene family | AT3G43660 | 24.793 | 1.31e-09 | 54.7 | |
| Tesi10g00429 | . | 5 | 350 | Nodulin-like gene family | AT3G18200 | 68.376 | 4.84e-175 | 489.0 | |
| Tesi10g00660 | . | 9 | 365 | Nodulin-like gene family | AT3G28050 | 50.418 | 1.33e-116 | 340.0 | |
| Tesi10g00661 | . | 9 | 365 | Nodulin-like gene family | AT3G28050 | 46.348 | 2.52e-105 | 313.0 | |
| Tesi10g00662 | . | 9 | 372 | Nodulin-like gene family | AT1G70260 | 48.626 | 3.66e-118 | 344.0 | |
| Tesi10g00663 | . | 18 | 358 | Nodulin-like gene family | AT5G40240 | 46.023 | 6.72e-98 | 293.0 | |
| Tesi10g00759 | . | 2 | 532 | Nodulin-like gene family | AT1G74780 | 60.145 | 0.0 | 643.0 | |
| Tesi10g01333 | . | 6 | 576 | Nodulin-like gene family | AT5G14120 | 73.98 | 0.0 | 872.0 | |
| Tesi11g00077 | . | 1 | 499 | Nodulin-like gene family | AT2G30300 | 47.238 | 3.34e-147 | 429.0 | |
| Tesi11g00144 | . | 1 | 740 | Nodulin-like gene family | AT4G19180 | 60.154 | 0.0 | 898.0 | |
| Tesi11g00991 | . | 33 | 115 | Nodulin-like gene family | AT1G80530 | 67.47 | 1.63e-33 | 123.0 | |
| Tesi11g01108 | . | 3 | 396 | Nodulin-like gene family | AT5G07050 | 64.428 | 0.0 | 526.0 | |
| Tesi13g00672 | . | 18 | 358 | Nodulin-like gene family | AT5G40240 | 44.348 | 2.15e-90 | 273.0 | |
| Tesi13g00862 | . | 3 | 396 | Nodulin-like gene family | AT5G07050 | 65.672 | 0.0 | 531.0 | |
| Tesi14g00456 | . | 2 | 335 | Nodulin-like gene family | AT1G68170 | 31.25 | 3.90e-54 | 181.0 | |
| Tesi14g00581 | . | 17 | 378 | Nodulin-like gene family | AT5G07050 | 38.692 | 4.81e-91 | 279.0 | |
| Tesi15g00351 | . | 7 | 561 | Nodulin-like gene family | AT1G80530 | 61.93 | 0.0 | 716.0 | |
| Tesi18g00674 | . | 281 | 562 | Nodulin-like gene family | AT4G19180 | 25.256 | 7.24e-17 | 80.1 | |
| Tesi18g01131 | . | 12 | 579 | Nodulin-like gene family | AT5G14120 | 74.15 | 0.0 | 870.0 | |
| Tesi19g00503 | . | 7 | 561 | Nodulin-like gene family | AT1G80530 | 59.658 | 0.0 | 698.0 | |
| Tesi19g00645 | . | 1 | 338 | Nodulin-like gene family | AT4G30420 | 38.71 | 1.89e-78 | 244.0 | |
| Tesi19g00646 | . | 1 | 355 | Nodulin-like gene family | AT4G30420 | 43.889 | 1.51e-96 | 288.0 | |
| Tesi19g00647 | . | 3 | 123 | Nodulin-like gene family | AT4G28040 | 52.066 | 7.01e-36 | 126.0 | |
| Tesi19g00649 | . | 1 | 361 | Nodulin-like gene family | AT4G30420 | 50.125 | 2.78e-138 | 398.0 | |
| Tesi19g00742 | . | 10 | 343 | Nodulin-like gene family | AT3G30340 | 32.047 | 1.89e-54 | 181.0 | |
| Tesi19g00743 | . | 209 | 345 | Nodulin-like gene family | AT3G30340 | 37.857 | 1.02e-27 | 103.0 | |
| Tesi19g00744 | . | 10 | 344 | Nodulin-like gene family | AT3G30340 | 32.558 | 9.23e-56 | 184.0 | |
| Tesi19g00774 | . | 2 | 343 | Nodulin-like gene family | AT3G30340 | 34.203 | 1.16e-54 | 181.0 | |
| Tesi20g00648 | . | 3 | 339 | Nodulin-like gene family | AT4G08300 | 35.015 | 9.81e-73 | 230.0 | |
| Tesi21g00016 | . | 9 | 345 | Nodulin-like gene family | AT3G30340 | 48.094 | 1.37e-119 | 348.0 | |
| Tesi21g00635 | . | 21 | 364 | Nodulin-like gene family | AT5G47470 | 47.175 | 1.30e-109 | 322.0 | |
| Tesi21g00957 | . | 1 | 569 | Nodulin-like gene family | AT4G19450 | 69.772 | 0.0 | 765.0 | |
| Tesi22g00016 | . | 5 | 203 | Nodulin-like gene family | AT5G45370 | 61.435 | 2.13e-90 | 268.0 | |
| Tesi22g00302 | . | 18 | 364 | Nodulin-like gene family | AT5G47470 | 50.7 | 5.98e-125 | 362.0 | |
| Tesi22g00914 | . | 7 | 125 | Nodulin-like gene family | AT2G37460 | 31.933 | 2.28e-18 | 81.3 | |
| Tesi22g00915 | . | 8 | 393 | Nodulin-like gene family | AT5G07050 | 23.834 | 7.50e-29 | 112.0 | |
| Tesi22g00916 | . | 124 | 326 | Nodulin-like gene family | AT1G09380 | 33.005 | 9.58e-40 | 139.0 | |
| Tesi22g00917 | . | 7 | 85 | Nodulin-like gene family | AT2G37460 | 39.759 | 1.02e-14 | 65.9 | |
| Tesi23g00035 | . | 8 | 579 | Nodulin-like gene family | AT5G14120 | 73.48 | 0.0 | 862.0 | |
| Tesi24g00243 | . | 16 | 186 | Nodulin-like gene family | AT3G43660 | 71.264 | 2.83e-89 | 260.0 | |
| Tesi24g00272 | . | 3 | 310 | Nodulin-like gene family | AT5G64700 | 49.838 | 2.30e-92 | 276.0 | |
| Tesi24g00908 | . | 16 | 565 | Nodulin-like gene family | AT4G34950 | 68.051 | 0.0 | 783.0 |