AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi22g00017 ATGGGACAACTTGCTAATGCTATAAATAGGAGAGTTGATGGAACACTTCCAAGTCAACTTAGTGGGAAGGTAGTTGAAGATAGTGTTAAGGAAAATCAGGATAAGAAAAATCAGCCCATTGTAGGGCCTTCTGAAATTGAGGGCAAGGGAAAGGATACTAAGGAAAAGGATCAAGACGAAGATTTGGCTCATTTCCTTGAATCGGAGGTCCTTTCCGAGGTCTCCGACCAGGAGGAGACGAAAACGGTGCCACCAATACCAATACCAATACCAATACCAATACCAATACCATCGAAGAGATTGCGCCTCGACAACGAGGGCACCTCTCAAACCGAGACTCCCAGCAAAATCCCGATACGGATCGAGACCGGGATTTTCAGCAAGATCCCTCCAGAGCTTTTCCATCACATCCTCAAATTCCTGTCTTCCGAGGATCTTACTGCATGCTCCTTGGTTTGTAGATTTCTGAACGATGCAGCATCCGATGAATGCTTATGGCGTCGCCTGTACTGTATGCGGTGGGGTCTGTCATCTCCTACAAAAAAGTTGCGTGATTGTGCTTGGAAAAAGCTTTATATCCAGCGTGATGAAGAGGACATGGTCGACTTTGTTAGGAACACTCCATCTGAGTTCAAGGAGTATTATATCCAAATGCAGGCAGCAAAGAGAGGCCAAGCACCTCTTCCTTCACTAGTGAACGACGATCGAATAATTCTTGACAAAACAGTGTCTGATCAAGTGTCAATTTGGAAAAGCAGCAGAGGTCTGACAGATGTGGTGGTTTCTGATCACACTTGTTCTGGAGAAACATGTTCTTACTACCAAATTGGAGATGTTTTTGTGTGTGAGAAGACTGGATTTGTTCACGTATGCGATGATACATGTCGAGAAGTTATTTTGGATCCCACCAATGAGCTTTTGGTTTGTACAATTTCTGGGCACTGTTTCGATAGATTACTCTCACCCGCTGAAATGGAACCCGATGCTTCTCAACAATTTGGATTGTGCAAAGAGGCCCGGTTACTAGTCAAGAGTAAGAATTCAAATAATTGTATCCTCTTTGGGCTTTTCTTCATTGGAGTCCAGGGGTTTGAGATGAGCGAGAGATGCCCTTCTAAGGCATTCTCAGTTAAGGCATAA 1140 44.21 MGQLANAINRRVDGTLPSQLSGKVVEDSVKENQDKKNQPIVGPSEIEGKGKDTKEKDQDEDLAHFLESEVLSEVSDQEETKTVPPIPIPIPIPIPIPSKRLRLDNEGTSQTETPSKIPIRIETGIFSKIPPELFHHILKFLSSEDLTACSLVCRFLNDAASDECLWRRLYCMRWGLSSPTKKLRDCAWKKLYIQRDEEDMVDFVRNTPSEFKEYYIQMQAAKRGQAPLPSLVNDDRIILDKTVSDQVSIWKSSRGLTDVVVSDHTCSGETCSYYQIGDVFVCEKTGFVHVCDDTCREVILDPTNELLVCTISGHCFDRLLSPAEMEPDASQQFGLCKEARLLVKSKNSNNCILFGLFFIGVQGFEMSERCPSKAFSVKA 379
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi22g00017 379 Pfam F-box-like 127 171 IPR001810 GO:0005515(InterPro)
Tesi22g00017 379 ProSiteProfiles F-box domain profile. 123 169 IPR001810 GO:0005515(InterPro)
Tesi22g00017 379 FunFam F-box family protein-like 114 200 - -
Tesi22g00017 379 MobiDBLite consensus disorder prediction 1 59 - -
Tesi22g00017 379 Gene3D - 114 200 - -
Tesi22g00017 379 CDD F-box-AtSKIP31-like 126 171 - -
Tesi22g00017 379 PANTHER F-BOX ONLY PROTEIN 3 117 333 IPR052121 GO:0005737(PANTHER)
Tesi22g00017 379 MobiDBLite consensus disorder prediction 12 26 - -
Tesi22g00017 379 SUPERFAMILY F-box domain 116 195 IPR036047 GO:0005515(InterPro)
Tesi22g00017 379 SMART fbox-2 129 169 IPR001810 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi22g00017 - -