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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi22g00279 ATGTCGAAGGAATCTGTTCGTTCTCCAGCAGTCGGAGATGGTGATCGTACTAATCTCGCTCGCACTTTCAAGTATTTGATGGGTCAGTTTTCTGTTAATCTCGTATTTTTCACGGTTTCTACCTATGATTTGATTGATTTCCACCCAACCCTTCATATATCTGTTGAAAATTTGATTTTTGGTTGTTCTCGGAAGCTCAGCTACGCAGTTTCTGTCGAGGGGAATCCCATTTATTTTCAATTCGTGGATTGTGAGACATCTCACGGAAGAGGACTACGCGGTAACCTTTTTGCAGTGCAATTTCATCTTTTTGTCACATGTATCTTGTTTCTTAGCCGGGAGGGATTTCGGCGAGCATGCATGCGGGCGGACATTAGACGTGATGGTGCTCCAGTGGAAGAGAATGCTGCAAAGCTATTGAAAGTAGCCTGGATGACTCTCCCAATTGGATTAATTATTACATTTGCAGCATGCATTTTTGTCTTCTGGTGGCAAGCACTAAACTTTTCCGATCCTTATGGACAAGCTATCTTGATTAATGGTAGTGGTGTGGTTTTGTCTTCTGCTTATAAACTCTAG 579 42.31 MSKESVRSPAVGDGDRTNLARTFKYLMGQFSVNLVFFTVSTYDLIDFHPTLHISVENLIFGCSRKLSYAVSVEGNPIYFQFVDCETSHGRGLRGNLFAVQFHLFVTCILFLSREGFRRACMRADIRRDGAPVEENAAKLLKVAWMTLPIGLIITFAACIFVFWWQALNFSDPYGQAILINGSGVVLSSAYKL 192
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi22g00279 192 PANTHER ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED 96 188 IPR007594 GO:0005789(PANTHER)|GO:0006488(InterPro)|GO:0016020(InterPro)|GO:0034203(PANTHER)
Tesi22g00279 192 Pfam Rft protein 97 177 IPR007594 GO:0006488(InterPro)|GO:0016020(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi22g00279 - -