Gene detail

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Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tesi22g00301	ATGCAGGCAATATTCTTTATTGATGTTGAAAATCCATGCGTAATAATGAGTCAAGACAAGAGCAGAGAATTTTTGCATTCGGGGAATGATAAGGATAAATTCAAGTTCTTTTTCAAGGCTACACTTCTACACCAAGTAAATGATCTATTACAATGTATTAGAAGTAATCTGGATGCTGCAACTGCACTGGTTGATGAACTGGACTCTTCCATAAGACCCATAGTTAAGGAACTTAATGAGTTGCAAGGGAAGATTAAAAACATGGAACAAGTAGAGGAAATATCTCAACAAGTACAACTGTTAAAGAAGAAACTTGCATGGGCCTGGGTATATGATGTAGACAAGCAAATCCAGGAACAAGGTGCAAAGCTTGAAAAGCTGAAAGATCGAATTCCTACTTGCCAAGCCAGAATTGATCGACAACTGGGTAAGGTGGAGGAACTGCAGGAAAGCCTTATACAGAAGAAAGCTCAAATTGAATCTATGATGAAAAAGACATCAGAAGTGAGGGGAATGAAGGATGAATTGCAGCACTATCTTTCCTTGGCTACAAAAGAGAAGCTTGAGCTAGAAGAAGAACATGGCCGCAAAACTAACCTTATTCAGAAGATGGCAAAGCGTGCTAGATTGCTTGAGCTACAAATTCATGATATTCAAGAGCAACATGTGAAAAATACACAGGCTGAAGAATTTGAGATAGAGGAAAGACTAAAGGGACTCCAGGATGAGGTTGATGCTGCTAATTTAACTCTTACAAGGTTGAAAGAAGAAGAGAATGCTTTATCTGAAAGCCTATCAATGACGATGAATGAAATCAAGAAGATTGTTGGTGAGATGGAAGACAATGAAAGAAAGTGTCGTGAGATCTGTTCTCACATCCATGAGCTTCAGCAACATCAAACCAACAAGGTAACAGCATTTGGAGGAGAGAGAGTAATCAATCTTTTACGTGCAATTGAGAGACACTATAAAAGATTCAAAAGCCCCCCTATTGGTCCTATTGGGGCTCACGTGGCATTGGTTAATGGTGATATGTGGGCTCCAGCTGTTGAAAATGCCATTGGGAAGTTGCTAAATGCTTTTATTGTGACGGATCATAAAGATTCTCTTCTTTTGAGAGGATGTGCTAGGGAAGCTAACTACCACCACCTTCAGATTATCATATATGATTTTGCCAGACCAAGATTGAATATTCCGAGTCACATGCTTCCCCAGACAAAGCACCCAACTACTCTTGGAGTTGTACATTCTGACAATTCTACTGTAGTGAATGTCTTGGTGGATATGGGTCACGCTGAGAGGCAAGTGCTTGTTAGAGATTATGAAGTAGGAAAAGAAGTTGCCTTCGACCAACGGATTTCAAACCTTAAGGAGGTTTATACACTAGAAGGACATAGAATGTTCTCTCGTGGTGCTGTCCAGACCATTCTTCCTCCAAACAAGAGGATTAAAACTGGCCGTCTTTGCAGCTCTTTTGATGATCAAATTAAGGATTTTGAAAGAGATGCATCAAACATAGAAGAACAAACTCGACAAGGCCGGGGAAGGAAAAGAGAGGCTGAGGAGTACCTTCGGGATCTGCAAGATAAGCTACAAAGTGTAAAGAAGCGACGTCTGAATGCAGAGAGGGGTTTCATGTCTAAAAAACTTAAATTACAAGATGTGAAGAATTCATATGCCGCAGAAGCTAGTTCAGGCTCCACATCTAATGTTGATGAGATTCGTCAAGAAATCTTGAAAGTCCAAGATGAAATACAAGAAAAGGAATTGCTGTTAGAAAAGTTCCAGGTGAGGATGACCGAGGCAGAAGCAAAGGCCAACAGTCTTAAATTATCATTTGAGAATTTATGTGAGTCGGCGAAAGGAGATATTGATGCCTTTGAGGGAGCGGAGCGTGAGTTAATGCTGATCGAAGAACATCTGCATTCGGCAGAAACGGAGAAAGGTCATTACGAAGGAGTCATGCATAAAAAGGTTCTTCCTGATATCAAAGAAGCAGAGGCGCAACATCAGGAGCTCCAACTCACCCGCCAGGAGAGCTGCAAGAAGGCTTCTATTATATGTCCTGAGAGTGAGGTTGAAGCTTTAGGAGGCTGCAATGGGAGTACCCCAGAGCAACTCAGTGCCCAATTAAATAGACTAAATCAGAGACTTCAGCATGAGAGTCAGAGATTTGCTGAATCAATTGATGATCTCAGAGAATTGTATGAGAAAAAAAAGTGTAAAATTATAAGAAAGCAGGAAACTTACGAATCTTTTCGTGAGAAATTGAACGTATGCCAGAAAGCCCTTAATTTGCGTTGGAGCAAGTTCCGAAGGAATGCAAGTCTCTTGAAACGTCAGTTGATTTGGCAGTTTAATGGACATTTGAGGAAGAAAGGTATTAGTGGAGAGATTGAGGTTAATTATGAAGAGAAGACCCTTTCAATAGAGGTCAAGATGCCCCAAGATGCATCGAGCAACACTGTTCGTGACACTAGAGGGCTTTCAGGTGGGGAGCGCTCTTTCTCAACATTATGCTTTTCATTAGCTCTTCACGAAATGACGGAGGCCCCATTTCGAGCAATGGATGAGTTTGATGTTTTTATGTTCTCATGGTACACTCTAATTCTTCAGGATGCAGTTAGCCGGAAAATCAGCTTGGACACCCTTGTAGATTTTGCATTGGCACAAGGCTCCCAATGGATATTCATAACCCCACATGATATCAGCGTGGTGAAGCCAGGGGAGAGGGTCAAGAAGCAGCAAATGGCAGCCCCTCGTTCTTGA	2769	41.39	MQAIFFIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLHQVNDLLQCIRSNLDAATALVDELDSSIRPIVKELNELQGKIKNMEQVEEISQQVQLLKKKLAWAWVYDVDKQIQEQGAKLEKLKDRIPTCQARIDRQLGKVEELQESLIQKKAQIESMMKKTSEVRGMKDELQHYLSLATKEKLELEEEHGRKTNLIQKMAKRARLLELQIHDIQEQHVKNTQAEEFEIEERLKGLQDEVDAANLTLTRLKEEENALSESLSMTMNEIKKIVGEMEDNERKCREICSHIHELQQHQTNKVTAFGGERVINLLRAIERHYKRFKSPPIGPIGAHVALVNGDMWAPAVENAIGKLLNAFIVTDHKDSLLLRGCAREANYHHLQIIIYDFARPRLNIPSHMLPQTKHPTTLGVVHSDNSTVVNVLVDMGHAERQVLVRDYEVGKEVAFDQRISNLKEVYTLEGHRMFSRGAVQTILPPNKRIKTGRLCSSFDDQIKDFERDASNIEEQTRQGRGRKREAEEYLRDLQDKLQSVKKRRLNAERGFMSKKLKLQDVKNSYAAEASSGSTSNVDEIRQEILKVQDEIQEKELLLEKFQVRMTEAEAKANSLKLSFENLCESAKGDIDAFEGAERELMLIEEHLHSAETEKGHYEGVMHKKVLPDIKEAEAQHQELQLTRQESCKKASIICPESEVEALGGCNGSTPEQLSAQLNRLNQRLQHESQRFAESIDDLRELYEKKKCKIIRKQETYESFREKLNVCQKALNLRWSKFRRNASLLKRQLIWQFNGHLRKKGISGEIEVNYEEKTLSIEVKMPQDASSNTVRDTRGLSGGERSFSTLCFSLALHEMTEAPFRAMDEFDVFMFSWYTLILQDAVSRKISLDTLVDFALAQGSQWIFITPHDISVVKPGERVKKQQMAAPRS	922

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tesi22g00301	922	Coils	Coil	571	612	-	-
	Tesi22g00301	922	Coils	Coil	138	165	-	-
	Tesi22g00301	922	Coils	Coil	489	509	-	-
	Tesi22g00301	922	SUPERFAMILY	Smc hinge domain	286	473	IPR036277	GO:0005515(InterPro)\|GO:0005524(InterPro)\|GO:0005694(InterPro)\|GO:0051276(InterPro)
	Tesi22g00301	922	Coils	Coil	663	683	-	-
	Tesi22g00301	922	Coils	Coil	627	647	-	-
	Tesi22g00301	922	Coils	Coil	223	257	-	-
	Tesi22g00301	922	Coils	Coil	173	193	-	-
	Tesi22g00301	922	Coils	Coil	201	221	-	-
	Tesi22g00301	922	PANTHER	STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6	5	920	-	GO:0000724(PANTHER)\|GO:0003684(PANTHER)\|GO:0003697(PANTHER)\|GO:0005634(PANTHER)\|GO:0030915(PANTHER)\|GO:0035861(PANTHER)
	Tesi22g00301	922	Coils	Coil	715	749	-	-
	Tesi22g00301	922	Coils	Coil	517	544	-	-
	Tesi22g00301	922	Gene3D	-	637	916	IPR027417	-
	Tesi22g00301	922	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	516	911	IPR027417	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tesi22g00301	K22804	structural maintenance of chromosomes protein 6

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tesi11g01288	.	480	1042	Structural Maintenance of Chromosomes family	AT5G15920	70.515	0.0	833.0
	Tesi11g01401	.	25	283	Structural Maintenance of Chromosomes family	AT5G15920	20.727	1.58e-06	49.7
	Tesi11g01402	.	25	302	Structural Maintenance of Chromosomes family	AT5G15920	21.088	3.64e-07	52.0
	Tesi22g00301	.	150	1057	Structural Maintenance of Chromosomes family	AT5G61460	62.527	0.0	1113.0