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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi22g00316 ATGGGGATAATCAGGAGCAGTTTCTCGTTCATGATGGGGACCTTGTGTGGAGTCTACATTGCTCAGAACTACAACGTTCCCAACATAAAGAAGCTTGCGAACACAGGGCTTTTGATGGCGAAGCACATCGAGGAGACCTATCGGAAGCCGAAGAAGAGGGATTCAGTTGGCCTGGTTCCATTTGATTTGACTTGTGGTGCATTTCTATGGTTGACTTAG 219 47.03 MGIIRSSFSFMMGTLCGVYIAQNYNVPNIKKLANTGLLMAKHIEETYRKPKKRDSVGLVPFDLTCGAFLWLT 72
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi22g00316 72 PANTHER OS07G0239500 PROTEIN 1 54 - -
Tesi22g00316 72 Pfam Domain of unknown function (DUF4535) 6 50 IPR027854 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi22g00316 K27319 short transmembrane mitochondrial protein 1
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr22:21814129 Tesi22g00317 Tesi-Chr22:21815859 tandem
Tesi Tesi-Chr1:21673702 Tesi22g00316 Tesi-Chr22:21814129 wgd