AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi22g00319 ATGGGTTTAAATTACTTATCTATCTCAGCGGTCTCGTCGGTGTTAAGCTTCGTAGGCCTCCTCCAATGGTGGACCAAATCATCAGTTGGCAAACTCATATCAGATGGCTCAATTGGTGAGCGTGTTATTCACTTGGAGAATGCTGGCCATGCACTAGAGCCGCTTTTGGGTTCGTACATCACAATTGCATTGCTGGCAAATTTTGCGCTCAACATATTTATTCTGCTCATTCTATGTCTTAAGACTATATTTTTTGTGCAGTTATATCCATCTGAAACTCGAAAAGTGGTGGAACGTCTTGTCAACTATGTCATTTACAAGGGGACATTTCTTCCACTGGTAGTCCCGCCTACAATATTTCAAGCAGGCATGTGGTCAACTTGGTTGACCGTACTTTGTTCCTTAAAGATGTTTCAAGCATTGGCTAGAGACCGTCTTGAACGTTTGAATGCATCCCCTTCTGCAACTCCATGGACATATTTTCGTGTATTTTCAGTCTTATTGCTGGTCTTCTCTATTGATATCTTCTGCCAGCTGGGAAGAAAATATCCAGTTCGTGTTATAGGAGGCTATGCCAAGGTCAGTTTCCGTTCCTTTTCATTTTACGGTTCCGATTTGAAAATATGTATGGAGCACCAGAATATTGTGAAGCTTGTGGAGTTGGAGGAAACAATAGGCTGGTTACTGGAGGATGAAGCAATATTGGCATACGTTTTTGTTTATGATGAGATGACTGGAAATTCAGAATCACTAATCTGGAGTATCTGGAATGGATTTGGAGATGACTGGATAACTATATCTGTAGTTGGAATACTAGAAGATGACTGA 828 41.06 MGLNYLSISAVSSVLSFVGLLQWWTKSSVGKLISDGSIGERVIHLENAGHALEPLLGSYITIALLANFALNIFILLILCLKTIFFVQLYPSETRKVVERLVNYVIYKGTFLPLVVPPTIFQAGMWSTWLTVLCSLKMFQALARDRLERLNASPSATPWTYFRVFSVLLLVFSIDIFCQLGRKYPVRVIGGYAKVSFRSFSFYGSDLKICMEHQNIVKLVELEETIGWLLEDEAILAYVFVYDEMTGNSESLIWSIWNGFGDDWITISVVGILEDD 275
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi22g00319 275 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF8 4 175 - GO:0000151(PANTHER)|GO:0005829(PANTHER)|GO:0005886(PANTHER)|GO:0006511(PANTHER)|GO:0016567(PANTHER)|GO:0034052(PANTHER)|GO:0061630(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi22g00319 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr1:21764743 Tesi22g00319 Tesi-Chr22:21942173 wgd