AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi22g00331 ATGATGAGTGGATTCAGAAGAATCGAGATACACGAACCCTCACCATCTTTCTTCGTGAGAGAAACCTCCATTTTCAGACCCAAAACCCTACTTTTCCCCACATTTGCAGAAGAAGTTGAGCTAGATTTCGCTCTCAATCTCTTAAACCCTAGCCCCTTTGATCTCTCTCTCCAATGTTTCTCCCCTCCAGCTTCTTCTACCTTTGAAGTCTTCGACACCGTTACGGATCTGATCCAGTTCGAGAAAACCCCGTTGTCGTCTTCTTACAGGAGGTTGCAGCAGCGAACTGGAGCTGATCGCTGCTTGCGAAGTCTCTGCGATCGGGTCTCAGCTCTCGAGCTTGGGTTTAATCGGGTCGTGAATGCCAAGATCAATGACCTTGATCGGAAGTATTCGTGGACTACCGAGATCAAGAGCCCGGAGAAGAACGCCGTTGATCGGAAGTATAAATGGTCGGTGGATATCAAAGGAGGGAAAAAGAACGGTGCCGTTGAAAAGACCTATAAATGGACGGCTAAAGGAAAGGACAAGGAAGCACCGATCTCCCACACTTACAGCTTAAAGGTGTCTACTTCTCCTGCTGAAGAGTGTAGCGGATCGAAGAAGGATAAGAAGAAGTGTTCGAAGGGTTCGACTGCCAAGCGCGCGGTTGAAATTGAAGAACCAGTCGAACAAGGAGCCGTTGTTCTAAGACAGGCTTTTGCCAAGAGGGGTGGAGCTGTTGAGAATGGAAAGGGCAAGAAGAAGGAATTGTCACCCCAAGATGCGGCTTTGATGATCCAGATGACCTTCAGAGCTTATCTGATACGTCGATCGCAGGCTCTTCGCGGGCTTCGGGAGCTGGCGGTGGCGAAGGCAAAATTGAAGGAGATAAGGGCGTTGTTCAACAACTTCTCCTACCGCCGTCGCATAGCCCATGATGCAGAGGAACGCCAGAGGTTCTCTGAGAGGGCCATTGTCATCTTGCTCACCGTTGATGCTATTGAGGGAGCTGATATTATGGTTCGAGCTGCACGGAAGTCAATGGTGGATGAGCTGGAGGCGATGCTTGATGTGGTTGACCCTCAGCCTCCTGAGAAACTAGGTTCAATTAAGAGGAGGAATTTTGATCTGCCCGAGGGCGGCATTCAGAAGGAAATTGCAGCAGGTGTGGCCGAGGTCGTCCAACTGCTTGATCAAGACGAAAGGAATGGGAGCAACAGCTTTGAAGTCTGCTTATGA 1221 49.71 MMSGFRRIEIHEPSPSFFVRETSIFRPKTLLFPTFAEEVELDFALNLLNPSPFDLSLQCFSPPASSTFEVFDTVTDLIQFEKTPLSSSYRRLQQRTGADRCLRSLCDRVSALELGFNRVVNAKINDLDRKYSWTTEIKSPEKNAVDRKYKWSVDIKGGKKNGAVEKTYKWTAKGKDKEAPISHTYSLKVSTSPAEECSGSKKDKKKCSKGSTAKRAVEIEEPVEQGAVVLRQAFAKRGGAVENGKGKKKELSPQDAALMIQMTFRAYLIRRSQALRGLRELAVAKAKLKEIRALFNNFSYRRRIAHDAEERQRFSERAIVILLTVDAIEGADIMVRAARKSMVDELEAMLDVVDPQPPEKLGSIKRRNFDLPEGGIQKEIAAGVAEVVQLLDQDERNGSNSFEVCL 406
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi22g00331 406 ProSiteProfiles IQ motif profile. 254 282 - -
Tesi22g00331 406 Pfam BAG domain 288 354 IPR003103 GO:0051087(InterPro)
Tesi22g00331 406 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 69 394 IPR040400 GO:0006457(PANTHER)|GO:0009506(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi22g00331 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr1:21922983 Tesi22g00331 Tesi-Chr22:22280810 wgd