Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi22g00332 | ATGGTGGGTTTTTCATCTGTTCCTCACTGGCTTGAAGCTCTTCTGGGAGAGAAGTTCTTCAATCCATGTTTCATTCATGAGTCTGCGAAGAAAAACGAGAAGAACGTGTTTTGTTTGGATTGTTGCACCAGCATCTGCCCTCAGTGCTTGTCTCCTCACCGTTCTCACCGACTCTTGCAGATTCGAAGGTATGTTTATCACGACGTTATTAGGTTGGACGATGTTGAGAAATTAATCGACTGTGCCTTTGTTCAAGCCTACACGACGAACAGTGCAAAGGTAGTATTTTTAAATCAAAGGCCTCAGTCTCGTCCCTTCAGAGGCTCCGGCAACATCTGCAGCACCTGCGACAGGAGCCTGCAAGACCCATATCTCTTCTGTTCTCTTGCCTGCAAGGTTCATCATCTGGTGAGAAGCGAAGGTGGGGTGTCGAAATATCTCTACGAGTGCGAATTTCTTCCCTTACCAGAAGGAGGAAAAGGTGAGAGCTTTTGCGAGTTCGAAGACGGACAAATGACTCCAGACTCGGTCCTTGAATCGGCTATTTCGCTACGAACATCGTCTGGCTCGAGCGCTAGTGGTGGGGCCATGGGTTGCAAGAACCTTGCGTGCACTGCTACAACCGAGTTCGTGAGGAAGAAACGTAGTAGCGTTTCGGTTTCTCGGACGACGTGCCGGCCGATATGCTCACCGGCGTCCGAAATTGCCGTCAATATGAACCGGAGAAAGGGTATCCCGCACCGGTCGCCGCTTTACTGA | 759 | 49.93 | MVGFSSVPHWLEALLGEKFFNPCFIHESAKKNEKNVFCLDCCTSICPQCLSPHRSHRLLQIRRYVYHDVIRLDDVEKLIDCAFVQAYTTNSAKVVFLNQRPQSRPFRGSGNICSTCDRSLQDPYLFCSLACKVHHLVRSEGGVSKYLYECEFLPLPEGGKGESFCEFEDGQMTPDSVLESAISLRTSSGSSASGGAMGCKNLACTATTEFVRKKRSSVSVSRTTCRPICSPASEIAVNMNRRKGIPHRSPLY | 252 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi22g00332 | 252 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 5 | 251 | - | - | |
| Tesi22g00332 | 252 | SUPERFAMILY | B-box zinc-binding domain | 22 | 65 | - | - | |
| Tesi22g00332 | 252 | Pfam | PLATZ transcription factor | 62 | 133 | IPR006734 | - | |
| Tesi22g00332 | 252 | ProSiteProfiles | Zinc finger B-box type profile. | 23 | 61 | IPR000315 | GO:0008270(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi22g00332 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr15:27508774 | Tesi22g00332 | Tesi-Chr22:22303766 | dispersed | |
| Tesi | Tesi-Chr22:22303766 | Tesi24g01039 | Tesi-Chr24:32051782 | dispersed | |
| Tesi | Tesi-Chr1:21969413 | Tesi22g00332 | Tesi-Chr22:22303766 | wgd | |
| Tesi | Tesi-Chr21:12438971 | Tesi22g00332 | Tesi-Chr22:22303766 | wgd |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Tesi | PLATZ | 3.4e-27 | No_clan | TF | PLATZ |