AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi22g00337 ATGGGAACGTTAGAGAAAGGTCGGGACGCCGATATTAGTGCGTGCGTATATATTCTTAAATCCGATATATACATGGCTTTTCTTCGGTTCTTTTCCTTGTTTTTGATCCACATTACCTTATTTACAAGCTCATGTTTTGCTGGTGATCCTTTTGTTAACTACACATGGGAGGTTTCTTACATCACTGCTTCTCCTTTAGGTGTTCAACAGCAGGTTGGTTTGTTTTTTTTTTTTTTTCCTCTTTTTTTTTATCTGTTTGTTCATCTTCTCATGTGGGTTATAGCCATTAACAGGGCATTTCCTGGTCCTTTTGTTAATGTGACTACGAATAACAATGTCGTGATCGAGGTACTGAACAAATTGGACGAGGATCTCCTTATGACTTGGGCCGGAATCCAACTACGTCGTAATTCATGGCAAGATGGCGTTCTCGGGACAAACTGTCCTATCCCTCCAAATTGGCAATCTACTTACCAGTTTCAGGTTAAGGATCAGATAGGGAGCTTCTTCTACTTCCCTTCTCTCAATTTTCAGAGAGCGGCGGGTGGGTATGGTGGTTTTATTATAAATAATCGGCCTGTGATCTCGCTGCCTTTTGCGACTCCAGATGGGGATATCATCATCATGATTGGTGATTGGTACACTCGGAACCATTCGGATCTGAGGAAGACCCTTAGTGATGGAAAAGACCTTGGGATGCCGGATGGCGTTGTCATTAACGGGAAAGGCCCTTACAGATACAACAATACACTCGTCCCAGATGGCATTGAATATGAATCTTTTGAAGTCCATCCAGGAAAAACTTATCGCATTCGTGTACACAATGTTGGAATCTCAACTAGTTTGAACTTCAGGATCCAGAACCATAATTTGCTTCTAGCTGAATCGGAGGGAACATACACAATGCAACAAAATTATACTAGCCTAGATATTCATGTTGGACAGTCTTATTCTTTTTTAGTTACCATGGATCAGAATGCAAGTACAGATTACTATATTGTAGCAAGTGCTAGGTTTGTGAATGAATCACTGTGGAAAAGAGTTACCGGTGTTGCCATCTTGCACTATTCCAATTCCAAGGGAAAGGCAACTGGTCCTCTCCCAGACTCACCAAATGATTTCTATGACAAGACATTTTCAATGAACCAGGCAAGATCCATCAGGTCGAATGGATCTGCTAGTGGTGCTCGCCCCAACCCACAGGGGTCTTTTAAATATGGCTTGATCAATGTGACCGATGTATATGTGTTGAAGAACGAGCCACTGGTGATGATTGACGGGAAACGTCGAGCTACACTCAGTGGGATCTCATTTGTTAATCCAGAAACGCCGATCAGGCTTGCTGATCAGTTCAAAGTCAAGGGAGTTTACAAGCTTGATTTCCCCAATGAGCCACTTACGGGATCACCCCGGATGGAAACATCAGTTATTAATGGTACATATAAAGGATTTATGGAAGTCATACTACAGAACAATGACACCACAATGCAGAGCTATCACATGGATGGATATGCCTTTTTTGTGGTTGGGATGGATTATGGGGAGTGGACAAATAGCAGCAGGGGCACATACAATAAGTGGGATGCCATTGCTCGCTGCACAGTGCAGGTTTTCCCTGGGGCATGGACAGCAATCTTAATCTCTATGGACAATGTTGGAGTGTGGAACCTGAGAGCAGAAAATCTCGACAGATGGTATCTCGGCCAAGAAACATATGTCAGGGTTGTCAATCCAGAGATTACTAACAAAACTGAGTTGCCCATTCCAGAGAATGTCCTTTATTGTGGTGCCCTAAAAACTATGCAGAAGCCACAAAAAACCTCTTCTGCAACATCAATCACCGGCGGAATATCAAAGATGTTCTTCACTCTACTAATGGTGCTCTTTGCTGCTGTTTCCAATTTCTGCTAA 1911 42.7 MGTLEKGRDADISACVYILKSDIYMAFLRFFSLFLIHITLFTSSCFAGDPFVNYTWEVSYITASPLGVQQQVGLFFFFFPLFFYLFVHLLMWVIAINRAFPGPFVNVTTNNNVVIEVLNKLDEDLLMTWAGIQLRRNSWQDGVLGTNCPIPPNWQSTYQFQVKDQIGSFFYFPSLNFQRAAGGYGGFIINNRPVISLPFATPDGDIIIMIGDWYTRNHSDLRKTLSDGKDLGMPDGVVINGKGPYRYNNTLVPDGIEYESFEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAESEGTYTMQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESLWKRVTGVAILHYSNSKGKATGPLPDSPNDFYDKTFSMNQARSIRSNGSASGARPNPQGSFKYGLINVTDVYVLKNEPLVMIDGKRRATLSGISFVNPETPIRLADQFKVKGVYKLDFPNEPLTGSPRMETSVINGTYKGFMEVILQNNDTTMQSYHMDGYAFFVVGMDYGEWTNSSRGTYNKWDAIARCTVQVFPGAWTAILISMDNVGVWNLRAENLDRWYLGQETYVRVVNPEITNKTELPIPENVLYCGALKTMQKPQKTSSATSITGGISKMFFTLLMVLFAAVSNFC 636
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi22g00337 636 Gene3D - 41 191 IPR008972 -
Tesi22g00337 636 Pfam Multicopper oxidase 205 359 IPR001117 -
Tesi22g00337 636 SUPERFAMILY Cupredoxins 47 219 IPR008972 -
Tesi22g00337 636 SUPERFAMILY Cupredoxins 199 395 IPR008972 -
Tesi22g00337 636 Gene3D - 203 393 IPR008972 -
Tesi22g00337 636 Pfam Multicopper oxidase 443 578 IPR011706 GO:0005507(InterPro)|GO:0016491(InterPro)
Tesi22g00337 636 FunFam Monocopper oxidase-like protein 203 396 - -
Tesi22g00337 636 Gene3D - 409 608 IPR008972 -
Tesi22g00337 636 PANTHER MULTI-COPPER OXIDASE 53 579 IPR045087 GO:0016491(PANTHER)|GO:0046658(PANTHER)
Tesi22g00337 636 Pfam Multicopper oxidase 92 192 IPR011707 GO:0005507(InterPro)
Tesi22g00337 636 SUPERFAMILY Cupredoxins 424 596 IPR008972 -
Tesi22g00337 636 FunFam Monocopper oxidase-like protein 408 606 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi22g00337 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr22:22426504 Tesi2g00513 Tesi-Chr2:11035565 dispersed
Tesi Tesi-Chr1:22021078 Tesi22g00337 Tesi-Chr22:22426504 wgd