Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi22g00351 | ATGGGGGCCGTAGTCGTTGGATCATCTTCCCGGAAGGCCATAGGCGCGAAGATCCATTCTCATCAAGCGATGGTGGAGCTCCTCAAATGGTGTTTTGAAGGAACAGTTCCGATCACGTTTTTGGTTGGGGCTCCATGGCATCTCTCTCTACCTGGGACACCTGCAACATTCCAGAGTATCAGGGACGTGTGTGGAGGGCTCATGGAGGTAGATCACAACACCTTATCCCATTCCGAACTTAGTGTTGCTCGTATTCGCCTTAAAGATTCCAATATGGTCGGAACACCTCATGTGATCAGACTCCCTGATCGGGGGGTTTTCTACTGGCTTATTATGGAAGTCCTTAGCGATGCCAACGACGTTGGAAACTCTGGGGATGCCATCATCCATGGGACCCCGTTCGCTGGCCATCTATCCCCGTCGCCGTTTCACAGTAGCATTGGCTCATTGCCAACTGAGGATGAAACCAACAGCTCGACTTTGCCTGCTTCGTTGCAATCCCTTGGGGGTCGATTTTGGGAGCATGATCGTGATGTCTCTGCTAATCTTGAGGTTGTCACCATCAATACGCATTCCCCAGTTAGTCTTGTGGTTGCATTGGGAGGGTTTACTCTACAGTATCAGTGCACTTCTGAGGTAGGCGCTTCCACTAGCTTAGTAGAGGATGATCAAGGGGTAGAGTTAGTTTGCGTGGAGGGCATCTCAGACAGAGGAGAAGAACCCTTCGTCCCATTGGGCCAAGGGCCACCAGTTTCGTGTTCTGCAACATATTCTACTCAAACTCTAGTTGTGGTGTCTTCACCTTCCCTTCCCGAGGTCGTGGCACTCGCCATTGGGCATCTCCCAGAGGCTAAGCACTCAGCAACAACGACAAATCAGGCGTGCCAAGGAGAAGTAGCGGTAGCCAGGGTCCAGAGTTTCACTCCATCATGTGTAGAATCGCCAGGCTCGGATTTGGTACCTATAAAGCCTGATTGTTTTGCGGAAGCAAGGATGGGCTCCGGTTTCAAGAGCCAAGGGTGCTTAGGAGTGCAAGGAACCATCTCAGATATCCTAGGTGTGCCTAGGGCTCTCCTTAAGAATAGGTCGTCCCTATTGTCAGGGCCTAGGGACTTGTCTCATCATCCTTTGAGGGGTGGGTTAGGAGAACTAGAAGGTGGGGTTGACAATGGGAACCCAAAGGAGACTTCGGCCTGGGTCCTATCCAAAATGGCCGATTTCGGTGCATTTGTGGGCTTATCATATGAGGGTCATGAGTCGGAAGTGTTGGGCCTCTTCTGTTCTTTGGAACCTCAACGGAGTTCCTCGATAGCCAATACCACTACGGGTGTGACGGAGTTGAGTAACAAACGGATTGAGAAGGAGCTTAGACGCTTATCCTCCTCCATTCAATCTCCTCATCCCAGTAATCCGCTTCGGAGTGTGGCTCAGAAGGCACGAGGTGTTTTTGTGGATCATAAGATATGCTTCCTTCATGTTTTTTTGAACAAAAACTCCTCTTTGATCATGCACAGGACGTTAAAGCCGTATCCCATTTCAGCTCACCGTATAGTACCTGCTCACATTGACCAACCGGACTGGGCGATTGATGGAATCCCGAAAATTGAACCCAATAGTGAGCTGCAGAATATTGTGGAGATCAAAACTCCAGAGCTGATTGAGAGAATGAGAGAAACTTGTCGATATTGCAACAGTTCTTCAGGGGAGGATGAAGGGTTGAAACCGCTTGAAAAGACGCGTTGGAAAGAGGTGCTAGAATGGTTTAAAAGGAGGATCAAGATTGCCAGGGTGGTTTTGGATGCAGCTGCTCGTGTAATTCGACCCGGTGTGACAACTGATGAAATTGATGAAGTGGTCCATAAGGCAACGATTGATGCTGGAGGGTATCCATCTCCACTAAATTATAATTACTTTCCAAAGTCTTGCTGCACGTCAGTTAATGAAGTCATCTGCCATGGAATTCCAGATGGCAGGAGATTAGAGGATGGTGACATTGTAAATGTTGATGTGACTGTGTACTATAAAGGTGTCCATGGTGATCTTAACGAAACATACTTTGTGGGGAAAGTTGATGAAGCATCTCAACAGCTGGTCCAATGTACTTATGAATGCTTGGAGAAAGCAATATCCATAGGTGCATTCACTACCTCAGCAGATCCTCCTCCTCCTGCATCAGCAAGCATCTGCACCCCCCAGTCCACCGCCATTAAACCTGGAGTACGATTTCGTGAAGTTGGGGAGGTCATCAATCGACATGCTTCAATGATGGGGTTCTCTGTGGTGAAATCAATCTGTGGTCATGGAATTGGAGAGCTTTTTCACTGCGCCCCAAATATTCCACATTATGGAAGAAATAAAGCAGTTGGTGTGATGAAAGTAGGGCAGACCTTTACAATTGAACCAATGATCAATGCCGGAGTTTGGCATGATCGGATGTGGCCTGATGGATGGACAGCTGTTACTGCAGATGGCAAACGCAGTGCTCAGTTTGAACACACTCTTCTGGTGACGGCGACTGGAGTCGAGGTTCTTACAGCACGGTTGCCTTCCTCACCCAATATGTACCCTTGGTTAAATGTTTAA | 2583 | 48.39 | MGAVVVGSSSRKAIGAKIHSHQAMVELLKWCFEGTVPITFLVGAPWHLSLPGTPATFQSIRDVCGGLMEVDHNTLSHSELSVARIRLKDSNMVGTPHVIRLPDRGVFYWLIMEVLSDANDVGNSGDAIIHGTPFAGHLSPSPFHSSIGSLPTEDETNSSTLPASLQSLGGRFWEHDRDVSANLEVVTINTHSPVSLVVALGGFTLQYQCTSEVGASTSLVEDDQGVELVCVEGISDRGEEPFVPLGQGPPVSCSATYSTQTLVVVSSPSLPEVVALAIGHLPEAKHSATTTNQACQGEVAVARVQSFTPSCVESPGSDLVPIKPDCFAEARMGSGFKSQGCLGVQGTISDILGVPRALLKNRSSLLSGPRDLSHHPLRGGLGELEGGVDNGNPKETSAWVLSKMADFGAFVGLSYEGHESEVLGLFCSLEPQRSSSIANTTTGVTELSNKRIEKELRRLSSSIQSPHPSNPLRSVAQKARGVFVDHKICFLHVFLNKNSSLIMHRTLKPYPISAHRIVPAHIDQPDWAIDGIPKIEPNSELQNIVEIKTPELIERMRETCRYCNSSSGEDEGLKPLEKTRWKEVLEWFKRRIKIARVVLDAAARVIRPGVTTDEIDEVVHKATIDAGGYPSPLNYNYFPKSCCTSVNEVICHGIPDGRRLEDGDIVNVDVTVYYKGVHGDLNETYFVGKVDEASQQLVQCTYECLEKAISIGAFTTSADPPPPASASICTPQSTAIKPGVRFREVGEVINRHASMMGFSVVKSICGHGIGELFHCAPNIPHYGRNKAVGVMKVGQTFTIEPMINAGVWHDRMWPDGWTAVTADGKRSAQFEHTLLVTATGVEVLTARLPSSPNMYPWLNV | 860 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi22g00351 | 860 | Gene3D | Creatinase-methionine aminopeptidase superfamily | 504 | 856 | IPR036005 | - | |
| Tesi22g00351 | 860 | SUPERFAMILY | Creatinase-aminopeptidase | 583 | 845 | IPR036005 | - | |
| Tesi22g00351 | 860 | PANTHER | METHIONINE AMINOPEPTIDASE | 497 | 562 | - | GO:0005829(PANTHER)|GO:0035551(PANTHER)|GO:0070006(PANTHER) | |
| Tesi22g00351 | 860 | Hamap | Methionine aminopeptidase [map]. | 577 | 847 | IPR002467 | GO:0006508(InterPro)|GO:0070006(InterPro) | |
| Tesi22g00351 | 860 | CDD | MetAP1 | 593 | 845 | IPR002467 | GO:0006508(InterPro)|GO:0070006(InterPro) | |
| Tesi22g00351 | 860 | PRINTS | Methionine aminopeptidase-1 signature | 642 | 655 | IPR001714 | - | |
| Tesi22g00351 | 860 | PRINTS | Methionine aminopeptidase-1 signature | 664 | 680 | IPR001714 | - | |
| Tesi22g00351 | 860 | Pfam | Metallopeptidase family M24 | 589 | 710 | IPR000994 | - | |
| Tesi22g00351 | 860 | Pfam | Metallopeptidase family M24 | 735 | 838 | IPR000994 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi22g00351 | K01265 | methionyl aminopeptidase [EC:3.4.11.18] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr18:16590324 | Tesi22g00351 | Tesi-Chr22:22741800 | dispersed | |
| Tesi | Tesi-Chr22:22741800 | Tesi2g00210 | Tesi-Chr2:4585587 | dispersed | |
| Tesi | Tesi-Chr22:22658548 | Tesi22g00351 | Tesi-Chr22:22741800 | proximal |